RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 HGH1Q9BTY7 390 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 POLG2Q9UHN1 485 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 ATXN7L1Q9ULK2 861 aaPredicted RBP16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 CLCA2Q9UQC9 943 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 MTO1Q9Y2Z2 717 aaKnown RBP16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 CACNA1AO00555 2505 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 UNC13CQ8NB66 2214 aa16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 HYAL3O43820 417 aaPredicted RBP16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 FAM155BO75949 473 aa16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 PROS1P07225 676 aa16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 MPC1LP0DKB6 136 aa16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 JUPP14923 745 aa16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 AMD1P17707 334 aa16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 MAPK9P45984 424 aa16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 TAS2R39P59534 338 aa16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 POU4F1Q01851 419 aa16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 CFHR1Q03591 330 aa16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 PRKG2Q13237 762 aa16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 PLCL1Q15111 1095 aa16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 MAP9Q49MG5 647 aa16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 LRRC8EQ6NSJ5 796 aa16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 CYHR1Q6ZMK1 362 aa16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 DCUN1D3Q8IWE4 304 aa16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 DCBLD1Q8N8Z6 715 aa16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 OR52E1Q8NGJ3 308 aa16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 JPH3Q8WXH2 748 aaPredicted RBP16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 DPYSL5Q9BPU6 564 aa16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 NUDT22Q9BRQ3 303 aa16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 TFB2MQ9H5Q4 396 aaKnown RBP16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 RDH14Q9HBH5 336 aa16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 OGFRQ9NZT2 677 aa16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 TSR3Q9UJK0 312 aaKnown RBP16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 WASF3Q9UPY6 502 aa16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 NFS1Q9Y697 457 aa16.65■□□□□ 0.26
RABGGTA-203ENST00000543002 C1orf105O95561 183 aa16.64■□□□□ 0.25
RABGGTA-203ENST00000543002 TYRP1P17643 537 aa16.64■□□□□ 0.25
RABGGTA-203ENST00000543002 SAT1P21673 171 aa16.64■□□□□ 0.25
RABGGTA-203ENST00000543002 CSF2RBP32927 897 aa16.64■□□□□ 0.25
RABGGTA-203ENST00000543002 PPM1FP49593 454 aaPredicted RBP16.64■□□□□ 0.25
RABGGTA-203ENST00000543002 RGS4P49798 205 aa16.64■□□□□ 0.25
RABGGTA-203ENST00000543002 KLHL35Q6PF15 583 aa16.64■□□□□ 0.25
RABGGTA-203ENST00000543002 WDR74Q6RFH5 385 aaPredicted RBP16.64■□□□□ 0.25
RABGGTA-203ENST00000543002 TMPRSS9Q7Z410 1059 aa16.64■□□□□ 0.25
RABGGTA-203ENST00000543002 UHMK1Q8TAS1 419 aaKnown RBP16.64■□□□□ 0.25
RABGGTA-203ENST00000543002 EEF1AKMT1Q8WVE0 214 aa16.64■□□□□ 0.25
RABGGTA-203ENST00000543002 SLC44A1Q8WWI5 657 aa16.64■□□□□ 0.25
RABGGTA-203ENST00000543002 LCN9Q8WX39 176 aa16.64■□□□□ 0.25
RABGGTA-203ENST00000543002 NCSTNQ92542 709 aa16.64■□□□□ 0.25
RABGGTA-203ENST00000543002 DEPDC7Q96QD5 511 aa16.64■□□□□ 0.25
RABGGTA-203ENST00000543002 PARD6BQ9BYG5 372 aa16.64■□□□□ 0.25
RABGGTA-203ENST00000543002 EPB41L4BQ9H329 900 aa16.64■□□□□ 0.25
RABGGTA-203ENST00000543002 POPDC3Q9HBV1 291 aa16.64■□□□□ 0.25
RABGGTA-203ENST00000543002 SLC39A10Q9ULF5 831 aa16.64■□□□□ 0.25
RABGGTA-203ENST00000543002 RUVBL2Q9Y230 463 aaKnown RBP16.64■□□□□ 0.25
RABGGTA-203ENST00000543002 TDRKHQ9Y2W6 561 aaKnown RBP16.64■□□□□ 0.25
RABGGTA-203ENST00000543002 FAM221BA6H8Z2 402 aa16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 KDM1AO60341 852 aa16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 PSIP1O75475 530 aaKnown RBP16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 TOP3BO95985 862 aaKnown RBP16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 ITGA2BP08514 1039 aa16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 TPBGLP0DKB5 382 aa16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 HOXB3P14651 431 aaPredicted RBP16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 CCNFP41002 786 aa16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 CAPZBP47756 277 aa16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 PDX1P52945 283 aa16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 PGGT1BP53609 377 aa16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 SLC12A2P55011 1212 aa16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 IL2P60568 153 aa16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 SLC29A2Q14542 456 aa16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 USP10Q14694 798 aaKnown RBP16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 ISXQ2M1V0 245 aa16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 TMEM71Q6P5X7 295 aa16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 TTC23LQ6PF05 361 aa16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 ZNF574Q6ZN55 896 aaPredicted RBP16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 PIWIL4Q7Z3Z4 852 aaKnown RBP16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 RASGRP3Q8IV61 690 aa16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 CEP97Q8IW35 865 aa16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 OR4E2Q8NGC2 313 aa16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 OR4D9Q8NGE8 314 aa16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 RSC1A1Q92681 617 aa16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 MRRFQ96E11 262 aaKnown RBP16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 TSPAN17Q96FV3 270 aa16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 TMEM74Q96NL1 305 aa16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 SRMSQ9H3Y6 488 aa16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 COL27A1Q8IZC6 1860 aaPredicted RBP16.63■□□□□ 0.25
RABGGTA-203ENST00000543002 KNTC1P50748 2209 aa16.62■□□□□ 0.25
RABGGTA-203ENST00000543002 FAM149AA5PLN7 773 aa16.62■□□□□ 0.25
RABGGTA-203ENST00000543002 CSO75390 466 aaKnown RBP16.62■□□□□ 0.25
RABGGTA-203ENST00000543002 TSPAN12O95859 305 aa16.62■□□□□ 0.25
RABGGTA-203ENST00000543002 TUBBP07437 444 aa16.62■□□□□ 0.25
RABGGTA-203ENST00000543002 ZNF37AP17032 561 aaPredicted RBP16.62■□□□□ 0.25
RABGGTA-203ENST00000543002 SHMT2P34897 504 aa16.62■□□□□ 0.25
RABGGTA-203ENST00000543002 ZFP36L1Q07352 338 aaKnown RBP16.62■□□□□ 0.25
RABGGTA-203ENST00000543002 TARDBPQ13148 414 aaKnown RBP eCLIP16.62■□□□□ 0.25
RABGGTA-203ENST00000543002 GRB7Q14451 532 aa16.62■□□□□ 0.25
RABGGTA-203ENST00000543002 UAP1Q16222 522 aaPredicted RBP16.62■□□□□ 0.25
RABGGTA-203ENST00000543002 TMEM207Q6UWW9 146 aa16.62■□□□□ 0.25
RABGGTA-203ENST00000543002 AMIGO1Q86WK6 493 aa16.62■□□□□ 0.25
RABGGTA-203ENST00000543002 OOSP2Q86WS3 158 aa16.62■□□□□ 0.25
RABGGTA-203ENST00000543002 PLXDC1Q8IUK5 500 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms