RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 TRAPPC9Q96Q05 1148 aa16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 ALS2CR12Q96Q35 445 aa16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 HGH1Q9BTY7 390 aa16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 SLC29A3Q9BZD2 475 aa16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 KLHL25Q9H0H3 589 aa16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 ARNT2Q9HBZ2 717 aa16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 GPR83Q9NYM4 423 aa16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 TFR2Q9UP52 801 aa16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 SPTBN1Q01082 2364 aaKnown RBP16.87■□□□□ 0.29
PPP1CA-210ENST00000542876 IGLV3-16A0A075B6K0 115 aa16.87■□□□□ 0.29
PPP1CA-210ENST00000542876 CCL22O00626 93 aa16.87■□□□□ 0.29
PPP1CA-210ENST00000542876 LDB2O43679 373 aa16.87■□□□□ 0.29
PPP1CA-210ENST00000542876 IPO7O95373 1038 aaKnown RBP16.87■□□□□ 0.29
PPP1CA-210ENST00000542876 ACRV1P26436 265 aa16.87■□□□□ 0.29
PPP1CA-210ENST00000542876 PTPN7P35236 360 aa16.87■□□□□ 0.29
PPP1CA-210ENST00000542876 RWDD2BP57060 319 aa16.87■□□□□ 0.29
PPP1CA-210ENST00000542876 MSLNQ13421 630 aaPredicted RBP16.87■□□□□ 0.29
PPP1CA-210ENST00000542876 ZNF789Q5FWF6 425 aa16.87■□□□□ 0.29
PPP1CA-210ENST00000542876 FAM69BQ5VUD6 431 aa16.87■□□□□ 0.29
PPP1CA-210ENST00000542876 JMJD6Q6NYC1 403 aaPredicted RBP16.87■□□□□ 0.29
PPP1CA-210ENST00000542876 FAM198BQ6UWH4 519 aa16.87■□□□□ 0.29
PPP1CA-210ENST00000542876 ARHGEF18Q6ZSZ5 1173 aa16.87■□□□□ 0.29
PPP1CA-210ENST00000542876 ZBTB2Q8N680 514 aa16.87■□□□□ 0.29
PPP1CA-210ENST00000542876 TC2NQ8N9U0 490 aa16.87■□□□□ 0.29
PPP1CA-210ENST00000542876 DNAJC1Q96KC8 554 aaKnown RBP16.87■□□□□ 0.29
PPP1CA-210ENST00000542876 IP6K3Q96PC2 410 aa16.87■□□□□ 0.29
PPP1CA-210ENST00000542876 FAM118BQ9BPY3 351 aa16.87■□□□□ 0.29
PPP1CA-210ENST00000542876 DHRS4Q9BTZ2 278 aa16.87■□□□□ 0.29
PPP1CA-210ENST00000542876 MFRPQ9BY79 579 aa16.87■□□□□ 0.29
PPP1CA-210ENST00000542876 XKR8Q9H6D3 395 aa16.87■□□□□ 0.29
PPP1CA-210ENST00000542876 ACTR10Q9NZ32 417 aa16.87■□□□□ 0.29
PPP1CA-210ENST00000542876 GPN3Q9UHW5 284 aaPredicted RBP16.87■□□□□ 0.29
PPP1CA-210ENST00000542876 QSOX1O00391 747 aa16.86■□□□□ 0.29
PPP1CA-210ENST00000542876 AP2A2O94973 939 aa16.86■□□□□ 0.29
PPP1CA-210ENST00000542876 CAPN1P07384 714 aa16.86■□□□□ 0.29
PPP1CA-210ENST00000542876 PVRP15151 417 aa16.86■□□□□ 0.29
PPP1CA-210ENST00000542876 PDHA2P29803 388 aa16.86■□□□□ 0.29
PPP1CA-210ENST00000542876 ATP1A4Q13733 1029 aa16.86■□□□□ 0.29
PPP1CA-210ENST00000542876 BOP1Q14137 746 aaKnown RBP16.86■□□□□ 0.29
PPP1CA-210ENST00000542876 KYNUQ16719 465 aa16.86■□□□□ 0.29
PPP1CA-210ENST00000542876 DENND5AQ6IQ26 1287 aa16.86■□□□□ 0.29
PPP1CA-210ENST00000542876 SPESP1Q6UW49 350 aa16.86■□□□□ 0.29
PPP1CA-210ENST00000542876 CDHR3Q6ZTQ4 885 aa16.86■□□□□ 0.29
PPP1CA-210ENST00000542876 TMTC1Q8IUR5 882 aa16.86■□□□□ 0.29
PPP1CA-210ENST00000542876 GLIS1Q8NBF1 620 aa16.86■□□□□ 0.29
PPP1CA-210ENST00000542876 SSC4DQ8WTU2 575 aa16.86■□□□□ 0.29
PPP1CA-210ENST00000542876 TCTN2Q96GX1 697 aa16.86■□□□□ 0.29
PPP1CA-210ENST00000542876 NUDT9Q9BW91 350 aa16.86■□□□□ 0.29
PPP1CA-210ENST00000542876 TRIM5Q9C035 493 aa16.86■□□□□ 0.29
PPP1CA-210ENST00000542876 NLE1Q9NVX2 485 aaPredicted RBP16.86■□□□□ 0.29
PPP1CA-210ENST00000542876 SMARCAL1Q9NZC9 954 aa16.86■□□□□ 0.29
PPP1CA-210ENST00000542876 PLEKHB1Q9UF11 243 aaPredicted RBP16.86■□□□□ 0.29
PPP1CA-210ENST00000542876 ASF1AQ9Y294 204 aa16.86■□□□□ 0.29
PPP1CA-210ENST00000542876 AP1M2Q9Y6Q5 423 aa16.86■□□□□ 0.29
PPP1CA-210ENST00000542876 TRBV5-4A0A0C4DH59 114 aa16.85■□□□□ 0.29
PPP1CA-210ENST00000542876 GOLGA6L9A6NEM1 432 aa16.85■□□□□ 0.29
PPP1CA-210ENST00000542876 H7C0S8 307 aa16.85■□□□□ 0.29
PPP1CA-210ENST00000542876 LIN7AO14910 233 aaPredicted RBP16.85■□□□□ 0.29
PPP1CA-210ENST00000542876 KDM1AO60341 852 aa16.85■□□□□ 0.29
PPP1CA-210ENST00000542876 KLHL41O60662 606 aa16.85■□□□□ 0.29
PPP1CA-210ENST00000542876 OR2B3O76000 313 aa16.85■□□□□ 0.29
PPP1CA-210ENST00000542876 CD63P08962 238 aa16.85■□□□□ 0.29
PPP1CA-210ENST00000542876 OTX2P32243 289 aa16.85■□□□□ 0.29
PPP1CA-210ENST00000542876 SHMT2P34897 504 aa16.85■□□□□ 0.29
PPP1CA-210ENST00000542876 CDKN1CP49918 316 aaPredicted RBP16.85■□□□□ 0.29
PPP1CA-210ENST00000542876 CACNG1Q06432 222 aa16.85■□□□□ 0.29
PPP1CA-210ENST00000542876 PARP6Q2NL67 630 aa16.85■□□□□ 0.29
PPP1CA-210ENST00000542876 MLIPQ5VWP3 458 aa16.85■□□□□ 0.29
PPP1CA-210ENST00000542876 ADGRF3Q8IZF5 1079 aa16.85■□□□□ 0.29
PPP1CA-210ENST00000542876 CLDN19Q8N6F1 224 aa16.85■□□□□ 0.29
PPP1CA-210ENST00000542876 C19orf47Q8N9M1 422 aaKnown RBP16.85■□□□□ 0.29
PPP1CA-210ENST00000542876 PNPLA2Q96AD5 504 aa16.85■□□□□ 0.29
PPP1CA-210ENST00000542876 FER1L6-AS2Q96M78 137 aa16.85■□□□□ 0.29
PPP1CA-210ENST00000542876 LRRC40Q9H9A6 602 aa16.85■□□□□ 0.29
PPP1CA-210ENST00000542876 CUEDC1Q9NWM3 386 aaPredicted RBP16.85■□□□□ 0.29
PPP1CA-210ENST00000542876 IRAK4Q9NWZ3 460 aa16.85■□□□□ 0.29
PPP1CA-210ENST00000542876 LUZP4Q9P127 313 aa16.85■□□□□ 0.29
PPP1CA-210ENST00000542876 NOTCH2Q04721 2471 aa16.84■□□□□ 0.29
PPP1CA-210ENST00000542876 PEX12O00623 359 aa16.84■□□□□ 0.29
PPP1CA-210ENST00000542876 IGHEP01854 428 aa16.84■□□□□ 0.29
PPP1CA-210ENST00000542876 FTH1P02794 183 aa16.84■□□□□ 0.29
PPP1CA-210ENST00000542876 TPH1P17752 444 aa16.84■□□□□ 0.29
PPP1CA-210ENST00000542876 NSG1P42857 185 aa16.84■□□□□ 0.29
PPP1CA-210ENST00000542876 RAPSNQ13702 412 aa16.84■□□□□ 0.29
PPP1CA-210ENST00000542876 ZNF658BQ4V348 819 aaPredicted RBP16.84■□□□□ 0.29
PPP1CA-210ENST00000542876 SYTL3Q4VX76 610 aa16.84■□□□□ 0.29
PPP1CA-210ENST00000542876 SLC6A19Q695T7 634 aa16.84■□□□□ 0.29
PPP1CA-210ENST00000542876 TTC13Q8NBP0 860 aa16.84■□□□□ 0.29
PPP1CA-210ENST00000542876 CLEC1AQ8NC01 280 aa16.84■□□□□ 0.29
PPP1CA-210ENST00000542876 STYXQ8WUJ0 223 aa16.84■□□□□ 0.29
PPP1CA-210ENST00000542876 ELMO1Q92556 727 aa16.84■□□□□ 0.29
PPP1CA-210ENST00000542876 CDKN2AIPNLQ96HQ2 116 aa16.84■□□□□ 0.29
PPP1CA-210ENST00000542876 SMAD5Q99717 465 aaKnown RBP16.84■□□□□ 0.29
PPP1CA-210ENST00000542876 NRTNQ99748 197 aa16.84■□□□□ 0.29
PPP1CA-210ENST00000542876 C5AR2Q9P296 337 aa16.84■□□□□ 0.29
PPP1CA-210ENST00000542876 NDOR1Q9UHB4 597 aa16.84■□□□□ 0.29
PPP1CA-210ENST00000542876 POLG2Q9UHN1 485 aa16.84■□□□□ 0.29
PPP1CA-210ENST00000542876 ICKQ9UPZ9 632 aa16.84■□□□□ 0.29
PPP1CA-210ENST00000542876 TDRKHQ9Y2W6 561 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms