RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 WDR37Q9Y2I8 494 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 MEMO1Q9Y316 297 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 PCDHB14Q9Y5E9 798 aa4.62□□□□□ -1.67
LIMS1-214ENST00000542845 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.62□□□□□ -1.67
LIMS1-214ENST00000542845 CFAP20Q9Y6A4 193 aaKnown RBP4.62□□□□□ -1.67
LIMS1-214ENST00000542845 ACANP16112 2415 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 TRAV17A0A0B4J275 112 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 GSAPA4D1B5 854 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 OR5K3A6NET4 321 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 FOXO6A8MYZ6 492 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 EEF2KO00418 725 aaKnown RBP4.61□□□□□ -1.67
LIMS1-214ENST00000542845 FGF10O15520 208 aaPredicted RBP4.61□□□□□ -1.67
LIMS1-214ENST00000542845 PDPK1O15530 556 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 HTRA2O43464 458 aaPredicted RBP4.61□□□□□ -1.67
LIMS1-214ENST00000542845 PROM1O43490 865 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 PRAMEF2O60811 474 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 CNOT3O75175 753 aaKnown RBP4.61□□□□□ -1.67
LIMS1-214ENST00000542845 CDK14O94921 469 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 PGLSO95336 258 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 SLC4A1P02730 911 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 HEXAP06865 529 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 UMODP07911 640 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 CD63P08962 238 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 HBQ1P09105 142 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 CYP11B1P15538 503 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 ABOP16442 354 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 CLCNKAP51800 687 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 DCDP81605 110 aaKnown RBP4.61□□□□□ -1.67
LIMS1-214ENST00000542845 PPP2R2BQ00005 443 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 GSTM4Q03013 218 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 LRRC63Q05C16 580 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 IL10RBQ08334 325 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 PRKAA1Q13131 559 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 MFAP5Q13361 173 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 XRCC4Q13426 336 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 CUL4AQ13619 759 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 GALNT3Q14435 633 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 RFTN1Q14699 578 aaPredicted RBP4.61□□□□□ -1.67
LIMS1-214ENST00000542845 LONRF1Q17RB8 773 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 TUBB8Q3ZCM7 444 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 ZNF658Q5TYW1 1059 aaPredicted RBP4.61□□□□□ -1.67
LIMS1-214ENST00000542845 NAA35Q5VZE5 725 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 TRIM65Q6PJ69 517 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 ABRAXAS1Q6UWZ7 409 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 STRADAQ7RTN6 431 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 ADGRG6Q86SQ4 1221 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 OOSP2Q86WS3 158 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 LSRQ86X29 649 aaPredicted RBP4.61□□□□□ -1.67
LIMS1-214ENST00000542845 SPPL2CQ8IUH8 684 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 GPR135Q8IZ08 494 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 PGBD5Q8N414 524 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 SIRT6Q8N6T7 355 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 OR4E2Q8NGC2 313 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 OR2Y1Q8NGV0 311 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 SLC30A5Q8TAD4 765 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 SUN3Q8TAQ9 357 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 GDAP1Q8TB36 358 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 CCDC110Q8TBZ0 833 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 AGAP11Q8TF27 550 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 SLC20A1Q8WUM9 679 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 PIH1D2Q8WWB5 315 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 NINJ1Q92982 152 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 ARSGQ96EG1 525 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 PSKH2Q96QS6 385 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 NUDCD1Q96RS6 583 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 WDR24Q96S15 920 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 CD180Q99467 661 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 C17orf62Q9BQA9 187 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 DPH2Q9BQC3 489 aaPredicted RBP4.61□□□□□ -1.67
LIMS1-214ENST00000542845 KRTAP17-1Q9BYP8 105 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 UCK2Q9BZX2 261 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 SPRTNQ9H040 489 aaPredicted RBP4.61□□□□□ -1.67
LIMS1-214ENST00000542845 TRIM39Q9HCM9 518 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 TXLNGQ9NUQ3 528 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 LRFN1Q9P244 771 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 SEMA5BQ9P283 1151 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 DNAJC12Q9UKB3 198 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 CFAP45Q9UL16 551 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 FZD10Q9ULW2 581 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 TRIM33Q9UPN9 1127 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 CHKBQ9Y259 395 aa4.61□□□□□ -1.67
LIMS1-214ENST00000542845 ANKRD12Q6UB98 2062 aa4.6□□□□□ -1.67
LIMS1-214ENST00000542845 A0A0J9YYE9 177 aa4.6□□□□□ -1.67
LIMS1-214ENST00000542845 C1orf232A0A0U1RR37 186 aa4.6□□□□□ -1.67
LIMS1-214ENST00000542845 C17orf113A0A1B0GUU1 675 aa4.6□□□□□ -1.67
LIMS1-214ENST00000542845 ESYT3A0FGR9 886 aa4.6□□□□□ -1.67
LIMS1-214ENST00000542845 C2CD4BA6NLJ0 364 aa4.6□□□□□ -1.67
LIMS1-214ENST00000542845 INAFM1C9JVW0 142 aa4.6□□□□□ -1.67
LIMS1-214ENST00000542845 NPIPA5E9PKD4 350 aa4.6□□□□□ -1.67
LIMS1-214ENST00000542845 SOCS6O14544 535 aa4.6□□□□□ -1.67
LIMS1-214ENST00000542845 OR2B3O76000 313 aa4.6□□□□□ -1.67
LIMS1-214ENST00000542845 ZNF202O95125 648 aa4.6□□□□□ -1.67
LIMS1-214ENST00000542845 B3GALT4O96024 378 aa4.6□□□□□ -1.67
LIMS1-214ENST00000542845 TRBC1P01850 177 aa4.6□□□□□ -1.67
LIMS1-214ENST00000542845 MMEP08473 750 aa4.6□□□□□ -1.67
LIMS1-214ENST00000542845 KRT3P12035 628 aa4.6□□□□□ -1.67
LIMS1-214ENST00000542845 UNGP13051 313 aaPredicted RBP4.6□□□□□ -1.67
LIMS1-214ENST00000542845 PVRP15151 417 aa4.6□□□□□ -1.67
LIMS1-214ENST00000542845 ST6GAL1P15907 406 aa4.6□□□□□ -1.67
LIMS1-214ENST00000542845 ZNF30P17039 623 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms