RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 HERC6Q8IVU3 1022 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 ZNF366Q8N895 744 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 TRIM43Q96BQ3 446 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 MOV10Q9HCE1 1003 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 ATP13A2Q9NQ11 1180 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 PCDH10Q9P2E7 1040 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 MYLKQ15746 1914 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 TRAV20A0A0B4J274 112 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 RNF103-CHMP3A0A140T963 221 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 ZCWPW2A0A1B0GU75 182 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 FAM149AA5PLN7 773 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 ZNF98A6NK75 572 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 TRPC5OSA6NMA1 111 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 H0Y626 953 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 SOCS2O14508 198 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 VAPBO95292 243 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 CAPNS1P04632 268 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 HLA-DQB2P05538 268 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 C8BP07358 591 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 ITGALP20701 1170 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 ADRA1AP35348 466 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 OPRL1P41146 370 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 TNK2Q07912 1038 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 LGALS3BPQ08380 585 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 OXA1LQ15070 435 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 C5orf22Q49AR2 442 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 C10orf120Q5SQS8 335 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 DENND5AQ6IQ26 1287 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 FBXL22Q6P050 247 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 CASC4Q6P4E1 433 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 PRR23BQ6ZRT6 265 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 CCDC149Q6ZUS6 474 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 MIB1Q86YT6 1006 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 RASSF5Q8WWW0 418 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 TTC9Q92623 222 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 C11orf24Q96F05 449 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 FCRL5Q96RD9 977 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 MCMBPQ9BTE3 642 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 ZSCAN5AQ9BUG6 496 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 ZYG11BQ9C0D3 744 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 TP63Q9H3D4 680 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 TMEM39AQ9NV64 488 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 RIC8BQ9NVN3 520 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 ZNF358Q9NW07 568 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 GIMAP2Q9UG22 337 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 ZNF229Q9UJW7 825 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 NUP205Q92621 2012 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 ZNF701M0R085 212 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 TPP1O14773 563 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 TLR5O60602 858 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 SNAP91O60641 907 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 CLPXO76031 633 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 HPCAL1P37235 193 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 MLLT10P55197 1068 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 CYP4F8P98187 520 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 OCA2Q04671 838 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 SELENBP1Q13228 472 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 COTL1Q14019 142 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 PCLAFQ15004 111 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 HERC3Q15034 1050 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 ZNF425Q6IV72 752 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 TIFABQ6ZNK6 161 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 FRA10AC1Q70Z53 315 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 KRT74Q7RTS7 529 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 CBR4Q8N4T8 237 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 SPATA22Q8NHS9 363 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 ASZ1Q8WWH4 475 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 OVCA2Q8WZ82 227 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 ARMC5Q96C12 935 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 ATXN7L3BQ96GX2 97 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 FBXL20Q96IG2 436 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 NAT9Q9BTE0 207 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 C1QTNF7Q9BXJ2 289 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 ANKRD60Q9BZ19 345 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 FAM96AQ9H5X1 160 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 NARFLQ9H6Q4 476 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 LRRC40Q9H9A6 602 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 GLOD4Q9HC38 313 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 SMOXQ9NWM0 555 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 KLQ9UEF7 1012 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 WARS2Q9UGM6 360 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 AFF4Q9UHB7 1163 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 EMCNQ9ULC0 261 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 AURKCQ9UQB9 309 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 PSAT1Q9Y617 370 aa7.86□□□□□ -1.15
PDLIM5-221ENST00000542407 MYO18AQ92614 2054 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 MKI67P46013 3256 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 ABHD14A-ACY1A0A1B0GW23 586 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 ILVBLA1L0T0 632 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 ZNF839A8K0R7 811 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 TAF4O00268 1085 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 ZNF195O14628 629 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 PLIN3O60664 434 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 DKK1O94907 266 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 GSRP00390 522 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 LINC00271P0C7V0 271 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 MATN1P21941 496 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 DCKP27707 260 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 HLA-FP30511 346 aa7.85□□□□□ -1.15
PDLIM5-221ENST00000542407 CCR10P46092 362 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms