RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 CDC26Q8NHZ8 85 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 MCOLN3Q8TDD5 553 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 ELMO1Q92556 727 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 ZNF583Q96ND8 569 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 BARD1Q99728 777 aaKnown RBP15.05■□□□□ -0
CNOT9-208ENST00000542068 DERL2Q9GZP9 239 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 SEPT3Q9UH03 358 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 CPQQ9Y646 472 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 LCHNA4D1U4 455 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 TRIM64A6NGJ6 449 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 KPNA4O00629 521 aaPredicted RBP15.05■□□□□ -0
CNOT9-208ENST00000542068 NDUFS2O75306 463 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 MLYCDO95822 493 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 FGF1P05230 155 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 BMP1P13497 986 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 EFNA1P20827 205 aaPredicted RBP15.05■□□□□ -0
CNOT9-208ENST00000542068 SLC26A3P40879 764 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 SEPHS1P49903 392 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 TXNDC11Q6PKC3 985 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 PSMA8Q8TAA3 256 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 LINC01599Q8WXQ3 324 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 RPL3LQ92901 407 aaKnown RBP15.05■□□□□ -0
CNOT9-208ENST00000542068 UBE2FQ969M7 185 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 ACTL8Q9H568 366 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 NSUN3Q9H649 340 aaKnown RBP15.05■□□□□ -0
CNOT9-208ENST00000542068 ITM2CQ9NQX7 267 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 LATS2Q9NRM7 1088 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 TMEM9Q9P0T7 183 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 RAI2Q9Y5P3 530 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 LOC100130705A0A1B0GUX0 176 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 H0YAE9 185 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 NDST3O95803 873 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 PKMP14618 531 aaKnown RBP15.04■□□□□ -0
CNOT9-208ENST00000542068 HOXC8P31273 242 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 ALDH7A1P49419 539 aaKnown RBP15.04■□□□□ -0
CNOT9-208ENST00000542068 SREBF2Q12772 1141 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 LRRC73Q5JTD7 316 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 PTRHD1Q6GMV3 140 aaKnown RBP15.04■□□□□ -0
CNOT9-208ENST00000542068 TPGS1Q6ZTW0 290 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 SLC7A5P1Q8MH63 180 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 PRDM5Q9NQX1 630 aaPredicted RBP15.04■□□□□ -0
CNOT9-208ENST00000542068 TMEM88BA6NKF7 163 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 OAZ2O95190 189 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 SERPINA1P01009 418 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 HLA-DPA1P20036 260 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 NKX2-5P52952 324 aaPredicted RBP15.04■□□□□ -0
CNOT9-208ENST00000542068 GP2P55259 537 aaKnown RBP15.04■□□□□ -0
CNOT9-208ENST00000542068 IFITM3Q01628 133 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 RAPSNQ13702 412 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 GTF2IRD2BQ6EKJ0 949 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 GTF2IRD2Q86UP8 949 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 LRRC49Q8IUZ0 686 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 C1orf74Q96LT6 269 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 ALPK1Q96QP1 1244 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 IPPKQ9H8X2 491 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 ABCB10Q9NRK6 738 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 DICER1Q9UPY3 1922 aaKnown RBP15.04■□□□□ -0
CNOT9-208ENST00000542068 SLC1A7O00341 560 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 E2F3O00716 465 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 PRRG1O14668 218 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 SEC22BO75396 215 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 RHOAP61586 193 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 GRSF1Q12849 480 aaKnown RBP eCLIP15.04■□□□□ -0
CNOT9-208ENST00000542068 SLC13A2Q13183 592 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 PARP15Q460N3 678 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 PAGE2Q7Z2X7 111 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 RORBQ92753 470 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 ZBTB18Q99592 522 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 AMBNQ9NP70 447 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 SLC6A13Q9NSD5 602 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 DNMT3LQ9UJW3 386 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 ZNF232Q9UNY5 417 aa15.04■□□□□ -0
CNOT9-208ENST00000542068 TYW5A2RUC4 315 aaKnown RBP15.03■□□□□ -0
CNOT9-208ENST00000542068 K7ERQ8 282 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 CXCR6O00574 342 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 CA12O43570 354 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 ACSL4O60488 711 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 COQ9O75208 318 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 C1QCP02747 245 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 GGT1P19440 569 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 EIF4EBP2Q13542 120 aaPredicted RBP15.03■□□□□ -0
CNOT9-208ENST00000542068 XKR7Q5GH72 579 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 MBOAT1Q6ZNC8 495 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 SLC16A12Q6ZSM3 486 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 CADM3Q8N126 398 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 C10orf111Q8N326 155 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 PAPD5Q8NDF8 572 aaKnown RBP15.03■□□□□ -0
CNOT9-208ENST00000542068 UGT2B28Q9BY64 529 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 DPY30Q9C005 99 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 FBXO10Q9UK96 956 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 SLC38A8A6NNN8 435 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 hCG_2039718K7EN88 272 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 PRAMEF11O60813 436 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 PRSS23O95084 383 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 ANGPTL1O95841 491 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 GSTM2P28161 218 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 CYP4F3Q08477 520 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 ARMC12Q5T9G4 340 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 GOLGA7Q7Z5G4 137 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 LIX1Q8N485 282 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms