RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 ESR1P03372 595 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 MYL2P10916 166 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 RALBP11234 206 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 ACADMP11310 421 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 C5AR1P21730 350 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 PDHA2P29803 388 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 HK3P52790 923 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 CDH13P55290 713 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 TMEM115Q12893 351 aaPredicted RBP7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 BNIP1Q12981 228 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 FZD5Q13467 585 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 PHKG1Q16816 387 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 PFKFB4Q16877 469 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 FAM83EQ2M2I3 478 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 AARS2Q5JTZ9 985 aaKnown RBP7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 VWA5B1Q5TIE3 1220 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 FAM46CQ5VWP2 391 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 KYAT3Q6YP21 454 aaKnown RBP7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 TRAPPC5Q8IUR0 188 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 ADHFE1Q8IWW8 467 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 GALNT15Q8N3T1 639 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 GABPB2Q8TAK5 448 aaPredicted RBP7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 BTN2A2Q8WVV5 523 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 RMDN2Q96LZ7 410 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 TSNARE1Q96NA8 513 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 TCF12Q99081 682 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 GATA5Q9BWX5 397 aaPredicted RBP7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 TSSK1BQ9BXA7 367 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 TRPV5Q9NQA5 729 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 SLC2A4RGQ9NR83 387 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 ABCF3Q9NUQ8 709 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 PNPOQ9NVS9 261 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 SIRPGQ9P1W8 387 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 ATXN10Q9UBB4 475 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 GNPTGQ9UJJ9 305 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 MMP17Q9ULZ9 603 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 PLEKHM1Q9Y4G2 1056 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 WDFY3Q8IZQ1 3526 aa7.58□□□□□ -1.2
AC005840.3-201ENST00000541888 A0A1W2PQ67 120 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 EDF1O60869 148 aaKnown RBP7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 SKAP2O75563 359 aaPredicted RBP7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 ATP5HO75947 161 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 FUCA1P04066 466 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 JUNP05412 331 aaKnown RBP7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 MTHFD2P13995 350 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 ZNF8P17098 575 aaPredicted RBP7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 MSH3P20585 1137 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 MPSTP25325 297 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 NSG1P42857 185 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 GDF5P43026 501 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 SLC1A6P48664 564 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 SUOXP51687 545 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 SLC18A1P54219 525 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 SH3BGRP55822 239 aaPredicted RBP7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 IL2P60568 153 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 DYNC1I2Q13409 638 aaKnown RBP7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 COL9A2Q14055 689 aaPredicted RBP7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 TAF11Q15544 211 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 CCDC153Q494R4 210 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 GPR33Q49SQ1 333 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 CCSMST1Q4G0I0 132 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 TMEM52BQ4KMG9 183 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 TPRG1LQ5T0D9 272 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 AGAP9Q5VTM2 703 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 TMEM220Q6QAJ8 160 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 TSSK4Q6SA08 328 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 ZYG11AQ6WRX3 759 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 CERS6Q6ZMG9 384 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 ZNF852Q6ZMS4 543 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 GALNT7Q86SF2 657 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 ZNF547Q8IVP9 402 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 TRAM1L1Q8N609 369 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 ZBTB2Q8N680 514 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 ZNF781Q8N8C0 355 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 ELMO1Q92556 727 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 KCNJ9Q92806 393 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 TSPAN17Q96FV3 270 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 DCUN1D1Q96GG9 259 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 NAF1Q96HR8 494 aaKnown RBP7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 TRAPPC9Q96Q05 1148 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 SORT1Q99523 831 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 ZSCAN5AQ9BUG6 496 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 MRPL46Q9H2W6 279 aaKnown RBP7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 C6orf106Q9H6K1 298 aaPredicted RBP7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 LATS2Q9NRM7 1088 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 NCKIPSDQ9NZQ3 722 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 GULP1Q9UBP9 304 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 MOSPD1Q9UJG1 213 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 RNF112Q9ULX5 631 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 PSMD13Q9UNM6 376 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 SORCS3Q9UPU3 1222 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 ANKRD6Q9Y2G4 727 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 CFAP20Q9Y6A4 193 aaKnown RBP7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 ZDBF2Q9HCK1 2354 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 NCOR1O75376 2440 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 IGLV3-16A0A075B6K0 115 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 A0A0G2JND7 137 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 TTC36A6NLP5 189 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 H0Y858 1186 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 PLRG1O43660 514 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms