RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 GSE1Q14687 1217 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 NKG7Q16617 165 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 TFDP3Q5H9I0 405 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 FBXO38Q6PIJ6 1188 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 ARSKQ6UWY0 536 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 CDHR3Q6ZTQ4 885 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 NCCRP1Q6ZVX7 275 aaPredicted RBP9.09□□□□□ -0.95
YBX3-211ENST00000541351 TRIM59Q8IWR1 403 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 SIRT6Q8N6T7 355 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 ZNF655Q8N720 491 aaPredicted RBP9.09□□□□□ -0.95
YBX3-211ENST00000541351 ACVR1CQ8NER5 493 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 OR4E2Q8NGC2 313 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 GDAP1Q8TB36 358 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 LCN9Q8WX39 176 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 HDAC10Q969S8 669 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 DHTKD1Q96HY7 919 aaPredicted RBP9.09□□□□□ -0.95
YBX3-211ENST00000541351 C12orf66Q96MD2 445 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 GSDMAQ96QA5 445 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 TUBGCP2Q9BSJ2 902 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 CRB3Q9BUF7 120 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 SELENOOQ9BVL4 669 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 NUP85Q9BW27 656 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 MAGEB5Q9BZ81 275 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 SLC6A16Q9GZN6 736 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 ARFGAP3Q9NP61 516 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 NLRC4Q9NPP4 1024 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 NOCTQ9UK39 431 aaKnown RBP9.09□□□□□ -0.95
YBX3-211ENST00000541351 PSMD13Q9UNM6 376 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 RNF6Q9Y252 685 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 L3MBTL1Q9Y468 752 aa9.09□□□□□ -0.95
YBX3-211ENST00000541351 TTC24A2A3L6 582 aaPredicted RBP9.08□□□□□ -0.96
YBX3-211ENST00000541351 A6NNC1 897 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 H7C1Q1 480 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 CNOT3O75175 753 aaKnown RBP9.08□□□□□ -0.96
YBX3-211ENST00000541351 SMC2O95347 1197 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 TPOP07202 933 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 PDHA1P08559 390 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 UGT1A1P22309 533 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 PTGS2P35354 604 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 DCAF7P61962 342 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 PMP22Q01453 160 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 OCA2Q04671 838 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 EXOC3L4Q17RC7 722 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 C3P1Q6ZMU1 363 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 NLRP9Q7RTR0 991 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 ZNF547Q8IVP9 402 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 ATPAF2Q8N5M1 289 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 C19orf47Q8N9M1 422 aaKnown RBP9.08□□□□□ -0.96
YBX3-211ENST00000541351 FAM57AQ8TBR7 257 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 NSMCE3Q96MG7 304 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 WDR24Q96S15 920 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 SPSB2Q99619 263 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 MENTQ9BUN1 341 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 ADGRE3Q9BY15 652 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 UCK2Q9BZX2 261 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 ZFYVE1Q9HBF4 777 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 NFKBIL1Q9UBC1 381 aaPredicted RBP9.08□□□□□ -0.96
YBX3-211ENST00000541351 TRPS1Q9UHF7 1281 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 HPSEQ9Y251 543 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 TLN2Q9Y4G6 2542 aa9.08□□□□□ -0.96
YBX3-211ENST00000541351 ASPDHA6ND91 283 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 FAM47E-STBD1D6RA91 191 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 ADAM10O14672 748 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 POP7O75817 140 aaKnown RBP9.07□□□□□ -0.96
YBX3-211ENST00000541351 SUN1O94901 812 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 ONECUT2O95948 504 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 ZNF24P17028 368 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 PMS1P54277 932 aaKnown RBP9.07□□□□□ -0.96
YBX3-211ENST00000541351 MAXP61244 160 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 RUNX1T1Q06455 604 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 TMEM115Q12893 351 aaPredicted RBP9.07□□□□□ -0.96
YBX3-211ENST00000541351 PTPRRQ15256 657 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 RAB6CQ53S08 254 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 C2CD6Q53TS8 623 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 Q5PR19 223 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 ZNF648Q5T619 568 aaPredicted RBP9.07□□□□□ -0.96
YBX3-211ENST00000541351 NAA35Q5VZE5 725 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 TXNRD3NBQ6F5E7 133 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 GJB7Q6PEY0 223 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 PRSS57Q6UWY2 283 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 RFX8Q6ZV50 586 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 ZNF677Q86XU0 584 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 LRRC49Q8IUZ0 686 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 ARHGAP12Q8IWW6 846 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 FAM71AQ8IYT1 594 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 LRRC75A-AS1Q8N1F1 130 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 LPCAT1Q8NF37 534 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 FAM222BQ8WU58 562 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 CPA5Q8WXQ8 436 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 PPM1MQ96MI6 270 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 VPS35Q96QK1 796 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 RAB6CQ9H0N0 254 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 DEF6Q9H4E7 631 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 SOX17Q9H6I2 414 aaPredicted RBP9.07□□□□□ -0.96
YBX3-211ENST00000541351 PCDH9Q9HC56 1237 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 AP4E1Q9UPM8 1137 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 PLCL2Q9UPR0 1127 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 ALG6Q9Y672 507 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 HCFC1P51610 2035 aa9.07□□□□□ -0.96
YBX3-211ENST00000541351 FOXN3O00409 490 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms