RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 IARS2Q9NSE4 1012 aaKnown RBP8.98□□□□□ -0.97
SNHG1-215ENST00000540904 WDR70Q9NW82 654 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 SLC39A1Q9NY26 324 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 FOXJ2Q9P0K8 574 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 EPHA6Q9UF33 1036 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 ZC3H7BQ9UGR2 993 aaKnown RBP8.98□□□□□ -0.97
SNHG1-215ENST00000540904 TSR3Q9UJK0 312 aaKnown RBP8.98□□□□□ -0.97
SNHG1-215ENST00000540904 FBXO5Q9UKT4 447 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 CDYLQ9Y232 598 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 TDRKHQ9Y2W6 561 aaKnown RBP8.98□□□□□ -0.97
SNHG1-215ENST00000540904 UTP11Q9Y3A2 253 aaKnown RBP8.98□□□□□ -0.97
SNHG1-215ENST00000540904 BOLA1Q9Y3E2 137 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 PCDHGA7Q9Y5G6 932 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 ZFC3H1O60293 1989 aaKnown RBP8.98□□□□□ -0.97
SNHG1-215ENST00000540904 IGF2RP11717 2491 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 A0A087WV48 116 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 IGHV5-51A0A0C4DH38 117 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 GSAPA4D1B5 854 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 B4E171 279 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 C9orf172C9J069 976 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 NDC80O14777 642 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 KPNA5O15131 536 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 SLCO2B1O94956 709 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 ANKRD34CP0C6C1 535 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 PKMP14618 531 aaKnown RBP8.97□□□□□ -0.97
SNHG1-215ENST00000540904 ITPKBP27987 946 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 TSPAN7P41732 249 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 FOXM1Q08050 763 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 PDIA2Q13087 525 aaKnown RBP8.97□□□□□ -0.97
SNHG1-215ENST00000540904 PRKAA1Q13131 559 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 WHAMMP3Q1A5X7 153 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 DUPD1Q68J44 220 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 UNC5AQ6ZN44 842 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 LRRC69Q6ZNQ3 347 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 AMIGO1Q86WK6 493 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 LMNTD2Q8IXW0 634 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 TBC1D21Q8IYX1 336 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 BMPERQ8N8U9 685 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 OR5K2Q8NHB8 316 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 GABPB2Q8TAK5 448 aaPredicted RBP8.97□□□□□ -0.97
SNHG1-215ENST00000540904 KCNE4Q8WWG9 221 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 PMEPA1Q969W9 287 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 CERS2Q96G23 380 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 TAAR9Q96RI9 348 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 MAP3K3Q99759 626 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 CTRCQ99895 268 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 WDR83Q9BRX9 315 aaKnown RBP8.97□□□□□ -0.97
SNHG1-215ENST00000540904 RAB33BQ9H082 229 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 RAB17Q9H0T7 212 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 CCDC68Q9H2F9 335 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 ZNF768Q9H5H4 540 aaKnown RBP8.97□□□□□ -0.97
SNHG1-215ENST00000540904 TFB2MQ9H5Q4 396 aaKnown RBP8.97□□□□□ -0.97
SNHG1-215ENST00000540904 PLAC1Q9HBJ0 212 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 WHRNQ9P202 907 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 POLG2Q9UHN1 485 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 RUVBL2Q9Y230 463 aaKnown RBP8.97□□□□□ -0.97
SNHG1-215ENST00000540904 B3GALT1Q9Y5Z6 326 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 TEX264Q9Y6I9 313 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 UNC13CQ8NB66 2214 aa8.97□□□□□ -0.97
SNHG1-215ENST00000540904 TLCD2A6NGC4 264 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 KIF2AO00139 706 aaPredicted RBP8.96□□□□□ -0.98
SNHG1-215ENST00000540904 BTN3A3O00478 584 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 BTN3A1O00481 513 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 TOX3O15405 576 aaPredicted RBP8.96□□□□□ -0.98
SNHG1-215ENST00000540904 KLK10O43240 276 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 HAUS5O94927 633 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 TUBB4AP04350 444 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 RPN2P04844 631 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 SHMT2P34897 504 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 ARL4DP49703 201 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 KPNA2P52292 529 aaKnown RBP8.96□□□□□ -0.98
SNHG1-215ENST00000540904 RAB15P59190 212 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 SH3BP2P78314 561 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 SLC7A5Q01650 507 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 MC2RQ01718 297 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 FASTKD3Q14CZ7 662 aaKnown RBP8.96□□□□□ -0.98
SNHG1-215ENST00000540904 PLEKHS1Q5SXH7 462 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 DCAF12Q5T6F0 453 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 ANKS6Q68DC2 871 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 C8orf74Q6P047 294 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 ZNF549Q6P9A3 640 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 TRMT10BQ6PF06 316 aaKnown RBP8.96□□□□□ -0.98
SNHG1-215ENST00000540904 CNSTQ6PJW8 725 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 C19orf48Q6RUI8 117 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 PRSS42Q7Z5A4 293 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 ZFAND4Q86XD8 727 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 SPACA3Q8IXA5 215 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 ZBED8Q8IZ13 594 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 ZBTB2Q8N680 514 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 C2CD4AQ8NCU7 369 aaPredicted RBP8.96□□□□□ -0.98
SNHG1-215ENST00000540904 FBXO36Q8NEA4 188 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 UBXN4Q92575 508 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 PPM1MQ96MI6 270 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 CD180Q99467 661 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 DDA1Q9BW61 102 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 ASPSCR1Q9BZE9 553 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 APMAPQ9HDC9 416 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 GRHL1Q9NZI5 618 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 SLC17A6Q9P2U8 582 aa8.96□□□□□ -0.98
SNHG1-215ENST00000540904 GALPQ9UBC7 116 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms