RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 TP53BP1Q12888 1972 aaPredicted RBP3.16□□□□□ -1.9
MDM2-227ENST00000540709 TDRD9Q8NDG6 1382 aaKnown RBP3.16□□□□□ -1.9
MDM2-227ENST00000540709 PTGES3LE9PB15 166 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 GAPDHSO14556 408 aaPredicted RBP3.16□□□□□ -1.9
MDM2-227ENST00000540709 AP3D1O14617 1153 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 EPB41L2O43491 1005 aaKnown RBP3.16□□□□□ -1.9
MDM2-227ENST00000540709 ZFAND5O76080 213 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 ACADMP11310 421 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 CA4P22748 312 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 PDX1P52945 283 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 MFAP4P55083 255 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 TPD52P55327 224 aaPredicted RBP3.16□□□□□ -1.9
MDM2-227ENST00000540709 ZNF239Q16600 458 aaKnown RBP3.16□□□□□ -1.9
MDM2-227ENST00000540709 SNAI3Q3KNW1 292 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 FASTKD1Q53R41 847 aaKnown RBP3.16□□□□□ -1.9
MDM2-227ENST00000540709 FAAH2Q6GMR7 532 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 FAM109BQ6ICB4 259 aaPredicted RBP3.16□□□□□ -1.9
MDM2-227ENST00000540709 ZNF613Q6PF04 617 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 PSRC1Q6PGN9 363 aaPredicted RBP3.16□□□□□ -1.9
MDM2-227ENST00000540709 COMMD2Q86X83 199 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 HOGA1Q86XE5 327 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 TTC39CQ8N584 583 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 NIPA2Q8N8Q9 360 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 BMPERQ8N8U9 685 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 OR5M8Q8NGP6 311 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 PGAM5Q96HS1 289 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 CEP295NLQ96MC4 621 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 OR6C1Q96RD1 312 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 NAP1L4Q99733 375 aaKnown RBP3.16□□□□□ -1.9
MDM2-227ENST00000540709 PKP2Q99959 881 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 C16orf70Q9BSU1 422 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 UPF3AQ9H1J1 476 aaKnown RBP3.16□□□□□ -1.9
MDM2-227ENST00000540709 CACNG4Q9UBN1 327 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 EPHA6Q9UF33 1036 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 HACL1Q9UJ83 578 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 OSGIN1Q9UJX0 560 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 WDR37Q9Y2I8 494 aa3.16□□□□□ -1.9
MDM2-227ENST00000540709 ANKRD61A6NGH8 418 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 KLF11O14901 512 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 XRCC3O43542 346 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 MAGEC1O60732 1142 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 NXPH2O95156 264 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 PRLRP16471 622 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 HADHAP40939 763 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 SLC8A3P57103 927 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 PRKCZQ05513 592 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 DRP2Q13474 957 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 NECTIN1Q15223 517 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 PHLDA2Q53GA4 152 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 SUSD1Q6UWL2 747 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 LACC1Q8IV20 430 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 TMEM139Q8IV31 216 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 LSMEM2Q8N112 164 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 EID3Q8N140 333 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 MAPKAPK5-AS1Q8N8E1 139 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 PPFIBP2Q8ND30 876 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 OR2AJ1Q8NGZ0 328 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 OMA1Q96E52 524 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 PIGQQ9BRB3 760 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 URM1Q9BTM9 101 aaKnown RBP3.15□□□□□ -1.91
MDM2-227ENST00000540709 FUCA2Q9BTY2 467 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 NUP85Q9BW27 656 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 RTN4RQ9BZR6 473 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 VN1R1Q9GZP7 353 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 RNF186Q9NXI6 227 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 LARSQ9P2J5 1176 aaKnown RBP3.15□□□□□ -1.91
MDM2-227ENST00000540709 ZDHHC2Q9UIJ5 367 aa3.15□□□□□ -1.91
MDM2-227ENST00000540709 IGKV6D-41A0A0C4DH26 115 aa3.14□□□□□ -1.91
MDM2-227ENST00000540709 PI4KAP2A4QPH2 592 aa3.14□□□□□ -1.91
MDM2-227ENST00000540709 MITFO75030 526 aaPredicted RBP3.14□□□□□ -1.91
MDM2-227ENST00000540709 SCGB1D1O95968 90 aa3.14□□□□□ -1.91
MDM2-227ENST00000540709 GATA1P15976 413 aaPredicted RBP3.14□□□□□ -1.91
MDM2-227ENST00000540709 RPL21P46778 160 aaKnown RBP3.14□□□□□ -1.91
MDM2-227ENST00000540709 ARF3P61204 181 aaPredicted RBP3.14□□□□□ -1.91
MDM2-227ENST00000540709 ARF1P84077 181 aaKnown RBP3.14□□□□□ -1.91
MDM2-227ENST00000540709 MS4A2Q01362 244 aa3.14□□□□□ -1.91
MDM2-227ENST00000540709 PNRC1Q12796 327 aaPredicted RBP3.14□□□□□ -1.91
MDM2-227ENST00000540709 SQLEQ14534 574 aa3.14□□□□□ -1.91
MDM2-227ENST00000540709 HLA-BQ31612 363 aa3.14□□□□□ -1.91
MDM2-227ENST00000540709 KLHL26Q53HC5 615 aa3.14□□□□□ -1.91
MDM2-227ENST00000540709 WLSQ5T9L3 541 aa3.14□□□□□ -1.91
MDM2-227ENST00000540709 GRTP1Q5TC63 336 aa3.14□□□□□ -1.91
MDM2-227ENST00000540709 SPINK14Q6IE38 97 aa3.14□□□□□ -1.91
MDM2-227ENST00000540709 TMCO3Q6UWJ1 677 aa3.14□□□□□ -1.91
MDM2-227ENST00000540709 LRRTM1Q86UE6 522 aa3.14□□□□□ -1.91
MDM2-227ENST00000540709 AACSQ86V21 672 aa3.14□□□□□ -1.91
MDM2-227ENST00000540709 MCEMP1Q8IX19 187 aa3.14□□□□□ -1.91
MDM2-227ENST00000540709 FBXO39Q8N4B4 442 aa3.14□□□□□ -1.91
MDM2-227ENST00000540709 OR13J1Q8NGT2 312 aa3.14□□□□□ -1.91
MDM2-227ENST00000540709 HDAC2Q92769 488 aaKnown RBP3.14□□□□□ -1.91
MDM2-227ENST00000540709 DPAGT1Q9H3H5 408 aa3.14□□□□□ -1.91
MDM2-227ENST00000540709 ZHX3Q9H4I2 956 aa3.14□□□□□ -1.91
MDM2-227ENST00000540709 SDR39U1Q9NRG7 319 aaPredicted RBP3.14□□□□□ -1.91
MDM2-227ENST00000540709 ARHGEF38Q9NXL2 777 aa3.14□□□□□ -1.91
MDM2-227ENST00000540709 EXO1Q9UQ84 846 aaKnown RBP3.14□□□□□ -1.91
MDM2-227ENST00000540709 PPP1R3CQ9UQK1 317 aa3.14□□□□□ -1.91
MDM2-227ENST00000540709 ANGPTL3Q9Y5C1 460 aa3.14□□□□□ -1.91
MDM2-227ENST00000540709 SOS1Q07889 1333 aaPredicted RBP3.14□□□□□ -1.91
MDM2-227ENST00000540709 A0A087X0M5 115 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 A0A1B0GX30 115 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms