RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 RGL4Q8IZJ4 473 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 C10orf111Q8N326 155 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 DHRSXQ8N5I4 330 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 ARMC5Q96C12 935 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 PYCR2Q96C36 320 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 PFDN4Q9NQP4 134 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 SMPD3Q9NY59 655 aaPredicted RBP11.28□□□□□ -0.6
C11orf54-214ENST00000540113 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.28□□□□□ -0.6
C11orf54-214ENST00000540113 HELZP42694 1942 aaKnown RBP11.28□□□□□ -0.6
C11orf54-214ENST00000540113 PLXNB3Q9ULL4 1909 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 hCG_2014768A0A024R1R8 64 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 ABHD14A-ACY1A0A1B0GW23 586 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 UPK3BL1B0FP48 263 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 UPK3BL2E5RIL1 263 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 FOXD2O60548 495 aaPredicted RBP11.28□□□□□ -0.6
C11orf54-214ENST00000540113 CSF2RAP15509 400 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 ELK4P28324 431 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 MRPL19P49406 292 aaKnown RBP11.28□□□□□ -0.6
C11orf54-214ENST00000540113 MAPK10P53779 464 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 SLC7A9P82251 487 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 PWP1Q13610 501 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 IMPG1Q17R60 797 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 ZXDCQ2QGD7 858 aaPredicted RBP11.28□□□□□ -0.6
C11orf54-214ENST00000540113 RETSATQ6NUM9 610 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 CRTC1Q6UUV9 634 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 ANKRD46Q86W74 232 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 RIMKLAQ8IXN7 391 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 TBC1D21Q8IYX1 336 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 CMTM8Q8IZV2 173 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 DPP10Q8N608 796 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 PACRGLQ8N7B6 248 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 ITFG1Q8TB96 612 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 TMBIM1Q969X1 311 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 ZBP1Q9H171 429 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 SLC25A37Q9NYZ2 338 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 CIDEBQ9UHD4 219 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 TMCO1Q9UM00 188 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 CDC14AQ9UNH5 594 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 TRBV5-4A0A0C4DH59 114 aa11.27□□□□□ -0.6
C11orf54-214ENST00000540113 H0Y858 1186 aa11.27□□□□□ -0.6
C11orf54-214ENST00000540113 ULK1O75385 1050 aa11.27□□□□□ -0.6
C11orf54-214ENST00000540113 CLCN2P51788 898 aa11.27□□□□□ -0.6
C11orf54-214ENST00000540113 B4GALNT1Q00973 533 aa11.27□□□□□ -0.6
C11orf54-214ENST00000540113 PLEKHG6Q3KR16 790 aa11.27□□□□□ -0.6
C11orf54-214ENST00000540113 AASDHQ4L235 1098 aaPredicted RBP11.27□□□□□ -0.6
C11orf54-214ENST00000540113 ATP13A5Q4VNC0 1218 aa11.27□□□□□ -0.6
C11orf54-214ENST00000540113 LRRC66Q68CR7 880 aa11.27□□□□□ -0.6
C11orf54-214ENST00000540113 MSRB3Q8IXL7 192 aa11.27□□□□□ -0.6
C11orf54-214ENST00000540113 CPXM2Q8N436 756 aa11.27□□□□□ -0.6
C11orf54-214ENST00000540113 PAPD5Q8NDF8 572 aaKnown RBP11.27□□□□□ -0.6
C11orf54-214ENST00000540113 BPIFB1Q8TDL5 484 aa11.27□□□□□ -0.6
C11orf54-214ENST00000540113 SLC13A3Q8WWT9 602 aa11.27□□□□□ -0.6
C11orf54-214ENST00000540113 MRPS31Q92665 395 aaKnown RBP11.27□□□□□ -0.6
C11orf54-214ENST00000540113 GFM2Q969S9 779 aaKnown RBP11.27□□□□□ -0.6
C11orf54-214ENST00000540113 ULK4Q96C45 1275 aa11.27□□□□□ -0.6
C11orf54-214ENST00000540113 LMLNQ96KR4 655 aa11.27□□□□□ -0.6
C11orf54-214ENST00000540113 DCUN1D5Q9BTE7 237 aa11.27□□□□□ -0.6
C11orf54-214ENST00000540113 DPY30Q9C005 99 aa11.27□□□□□ -0.6
C11orf54-214ENST00000540113 THEGQ9P2T0 379 aa11.27□□□□□ -0.6
C11orf54-214ENST00000540113 LSM7Q9UK45 103 aaKnown RBP11.27□□□□□ -0.6
C11orf54-214ENST00000540113 PCDHB3Q9Y5E6 796 aa11.27□□□□□ -0.6
C11orf54-214ENST00000540113 PRRC2BQ5JSZ5 2229 aaKnown RBP11.27□□□□□ -0.61
C11orf54-214ENST00000540113 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.27□□□□□ -0.61
C11orf54-214ENST00000540113 A0A1W2PRU2 124 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 UPK1AO00322 258 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 MANBAO00462 879 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 AREL1O15033 823 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 GSTA4O15217 222 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 RGS14O43566 566 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 NOBOXO60393 691 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 LRATO95237 230 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 KCNH1O95259 989 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 CLTBP09497 229 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 RPS3P23396 243 aaKnown RBP eCLIP11.27□□□□□ -0.616e-6■■■□□ 17.9
C11orf54-214ENST00000540113 CCR7P32248 378 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 SPAM1P38567 509 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 CAPGP40121 348 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 CSNK1DP48730 415 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 HSPA14Q0VDF9 509 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 PMS2P3Q13401 168 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 ADRM1Q16186 407 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 STK32CQ86UX6 486 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 PROSER1Q86XN7 944 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 VRK3Q8IV63 474 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 NXPE1Q8N323 547 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 HM13Q8TCT9 377 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 GTF2H4Q92759 462 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 ACDQ96AP0 544 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 ASIC4Q96FT7 647 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 MUS81Q96NY9 551 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 SMURF2Q9HAU4 748 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 ABCB8Q9NUT2 735 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 LIMD1Q9UGP4 676 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 DLGAP4Q9Y2H0 992 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 SH3BP1Q9Y3L3 701 aa11.27□□□□□ -0.61
C11orf54-214ENST00000540113 K7EPI3 171 aa11.26□□□□□ -0.61
C11orf54-214ENST00000540113 LEFTY2O00292 366 aa11.26□□□□□ -0.61
C11orf54-214ENST00000540113 ABCB7O75027 752 aa11.26□□□□□ -0.61
C11orf54-214ENST00000540113 BMP10O95393 424 aa11.26□□□□□ -0.61
C11orf54-214ENST00000540113 PDYNP01213 254 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms