RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 WWOXQ9NZC7 414 aa15.77■□□□□ 0.12
TRAF3-204ENST00000539721 DGKBQ9Y6T7 804 aa15.77■□□□□ 0.12
TRAF3-204ENST00000539721 LRRC14BA6NHZ5 514 aa15.77■□□□□ 0.11
TRAF3-204ENST00000539721 SUPT7LO94864 414 aa15.77■□□□□ 0.11
TRAF3-204ENST00000539721 AGTR2P50052 363 aa15.77■□□□□ 0.11
TRAF3-204ENST00000539721 AP1S2P56377 157 aa15.77■□□□□ 0.11
TRAF3-204ENST00000539721 CTBSQ01459 385 aa15.77■□□□□ 0.11
TRAF3-204ENST00000539721 GABPB1Q06547 395 aaPredicted RBP15.77■□□□□ 0.11
TRAF3-204ENST00000539721 OVGP1Q12889 678 aa15.77■□□□□ 0.11
TRAF3-204ENST00000539721 TCEA2Q15560 299 aa15.77■□□□□ 0.11
TRAF3-204ENST00000539721 UNC50Q53HI1 259 aa15.77■□□□□ 0.11
TRAF3-204ENST00000539721 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.77■□□□□ 0.11
TRAF3-204ENST00000539721 UNC5DQ6UXZ4 953 aa15.77■□□□□ 0.11
TRAF3-204ENST00000539721 BMP8AQ7Z5Y6 402 aa15.77■□□□□ 0.11
TRAF3-204ENST00000539721 PARGQ86W56 976 aa15.77■□□□□ 0.11
TRAF3-204ENST00000539721 PPP4R1Q8TF05 950 aa15.77■□□□□ 0.11
TRAF3-204ENST00000539721 RMDN2Q96LZ7 410 aa15.77■□□□□ 0.11
TRAF3-204ENST00000539721 C7orf26Q96N11 449 aa15.77■□□□□ 0.11
TRAF3-204ENST00000539721 CCT8L2Q96SF2 557 aa15.77■□□□□ 0.11
TRAF3-204ENST00000539721 DRC3Q9H069 523 aa15.77■□□□□ 0.11
TRAF3-204ENST00000539721 TMEM168Q9H0V1 697 aa15.77■□□□□ 0.11
TRAF3-204ENST00000539721 TRNAU1APQ9NX07 287 aaKnown RBP15.77■□□□□ 0.11
TRAF3-204ENST00000539721 TP53BP1Q12888 1972 aaPredicted RBP15.76■□□□□ 0.11
TRAF3-204ENST00000539721 PRR19A6NJB7 356 aa15.76■□□□□ 0.11
TRAF3-204ENST00000539721 PDZK1P1A8MUH7 402 aa15.76■□□□□ 0.11
TRAF3-204ENST00000539721 TLR4O00206 839 aa15.76■□□□□ 0.11
TRAF3-204ENST00000539721 RRP9O43818 475 aaKnown RBP15.76■□□□□ 0.11
TRAF3-204ENST00000539721 C1orf105O95561 183 aa15.76■□□□□ 0.11
TRAF3-204ENST00000539721 ARRB2P32121 409 aa15.76■□□□□ 0.11
TRAF3-204ENST00000539721 SERPINB5P36952 375 aa15.76■□□□□ 0.11
TRAF3-204ENST00000539721 CCR10P46092 362 aa15.76■□□□□ 0.11
TRAF3-204ENST00000539721 DHPSP49366 369 aaPredicted RBP15.76■□□□□ 0.11
TRAF3-204ENST00000539721 C18orf21Q32NC0 220 aaPredicted RBP15.76■□□□□ 0.11
TRAF3-204ENST00000539721 ZNF542PQ5EBM4 170 aa15.76■□□□□ 0.11
TRAF3-204ENST00000539721 CDKL4Q5MAI5 379 aa15.76■□□□□ 0.11
TRAF3-204ENST00000539721 ANKS6Q68DC2 871 aa15.76■□□□□ 0.11
TRAF3-204ENST00000539721 RPS27LQ71UM5 84 aaKnown RBP15.76■□□□□ 0.11
TRAF3-204ENST00000539721 CRLF3Q8IUI8 442 aa15.76■□□□□ 0.11
TRAF3-204ENST00000539721 C1orf216Q8TAB5 229 aa15.76■□□□□ 0.11
TRAF3-204ENST00000539721 TFGQ92734 400 aaPredicted RBP15.76■□□□□ 0.11
TRAF3-204ENST00000539721 ESAMQ96AP7 390 aa15.76■□□□□ 0.11
TRAF3-204ENST00000539721 RHBDF1Q96CC6 855 aa15.76■□□□□ 0.11
TRAF3-204ENST00000539721 CNDP1Q96KN2 507 aa15.76■□□□□ 0.11
TRAF3-204ENST00000539721 GSTO2Q9H4Y5 243 aa15.76■□□□□ 0.11
TRAF3-204ENST00000539721 PTBP2Q9UKA9 531 aaKnown RBP15.76■□□□□ 0.11
TRAF3-204ENST00000539721 ASF1AQ9Y294 204 aa15.76■□□□□ 0.11
TRAF3-204ENST00000539721 TNPO3Q9Y5L0 923 aaKnown RBP15.76■□□□□ 0.11
TRAF3-204ENST00000539721 ST14Q9Y5Y6 855 aa15.76■□□□□ 0.11
TRAF3-204ENST00000539721 FANCMQ8IYD8 2048 aa15.76■□□□□ 0.11
TRAF3-204ENST00000539721 TAPBPO15533 448 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 FAM107AO95990 144 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 RPS17P08708 135 aaKnown RBP15.75■□□□□ 0.11
TRAF3-204ENST00000539721 AK4P27144 223 aaPredicted RBP15.75■□□□□ 0.11
TRAF3-204ENST00000539721 ACTR1BP42025 376 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 ACTR1AP61163 376 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 TERF2Q15554 542 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 LYSMD4Q5XG99 296 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 PMS2CLQ68D20 193 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 CAPRIN2Q6IMN6 1127 aaKnown RBP15.75■□□□□ 0.11
TRAF3-204ENST00000539721 FRMD7Q6ZUT3 714 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 PHACTR4Q8IZ21 702 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 TCAIMQ8N3R3 496 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 FBXO15Q8NCQ5 510 aaPredicted RBP15.75■□□□□ 0.11
TRAF3-204ENST00000539721 BCAS4Q8TDM0 211 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 SORT1Q99523 831 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 C1QTNF3Q9BXJ4 246 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 TCEAL2Q9H3H9 227 aaPredicted RBP15.75■□□□□ 0.11
TRAF3-204ENST00000539721 TNRC6BQ9UPQ9 1833 aaKnown RBP15.75■□□□□ 0.11
TRAF3-204ENST00000539721 WDR37Q9Y2I8 494 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 ZDBF2Q9HCK1 2354 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 ATXN2Q99700 1313 aaKnown RBP15.75■□□□□ 0.11
TRAF3-204ENST00000539721 KRT87PA6NCN2 255 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 BCAT2O15382 392 aaPredicted RBP15.75■□□□□ 0.11
TRAF3-204ENST00000539721 RPN2P04844 631 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 CHRNGP07510 517 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 ITPKAP23677 461 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 AVPR2P30518 371 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 HSPA7P48741 367 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 HNMTP50135 292 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 BLKP51451 505 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 NAA20P61599 178 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 ILF3Q12906 894 aaKnown RBP eCLIP15.75■□□□□ 0.11
TRAF3-204ENST00000539721 PCBP2Q15366 365 aaKnown RBP eCLIP15.75■□□□□ 0.11
TRAF3-204ENST00000539721 CCSMST1Q4G0I0 132 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 ARL13AQ5H913 290 aaPredicted RBP15.75■□□□□ 0.11
TRAF3-204ENST00000539721 TTC23LQ6PF05 361 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 SLC30A9Q6PML9 568 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 ATG14Q6ZNE5 492 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 PHC3Q8NDX5 983 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 CCL4L1Q8NHW4 92 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 MAGEC3Q8TD91 643 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 UBTD2Q8WUN7 234 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 CCDC138Q96M89 665 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 C12orf66Q96MD2 445 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 INSM2Q96T92 566 aaPredicted RBP15.75■□□□□ 0.11
TRAF3-204ENST00000539721 TMEM79Q9BSE2 394 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 PRDM8Q9NQV8 689 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 DNAJC28Q9NX36 388 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 CIDEBQ9UHD4 219 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 KLF15Q9UIH9 416 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms