RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 AKAP13Q12802 2813 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 CPED1A4D0V7 1026 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 NUDT21O43809 227 aaKnown RBP12.66□□□□□ -0.38
CCDC42-202ENST00000539522 KRT37O76014 449 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 KRT38O76015 456 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 ALDOAP04075 364 aaKnown RBP12.66□□□□□ -0.38
CCDC42-202ENST00000539522 ITGA2BP08514 1039 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 SNRPAP09012 282 aaKnown RBP12.66□□□□□ -0.38
CCDC42-202ENST00000539522 CEACAM1P13688 526 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 VCLP18206 1134 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 CSF2RBP32927 897 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 MAGEA12P43365 314 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 NOVA1P51513 510 aaKnown RBP12.66□□□□□ -0.38
CCDC42-202ENST00000539522 PDX1P52945 283 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 OR1D5P58170 312 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 MAGOHP61326 146 aaKnown RBP12.66□□□□□ -0.38
CCDC42-202ENST00000539522 HHEXQ03014 270 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 ILF2Q12905 390 aaKnown RBP12.66□□□□□ -0.38
CCDC42-202ENST00000539522 DLG1Q12959 904 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 ABRQ12979 859 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 GPR18Q14330 331 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.66□□□□□ -0.38
CCDC42-202ENST00000539522 FAM45BPQ6NSW5 357 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 OTOAQ7RTW8 1153 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 PIWIL4Q7Z3Z4 852 aaKnown RBP12.66□□□□□ -0.38
CCDC42-202ENST00000539522 SPRED1Q7Z699 444 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 CMC1Q7Z7K0 106 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 CYP4X1Q8N118 509 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 ARFGAP2Q8N6H7 521 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 FAM45AQ8TCE6 357 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 ASZ1Q8WWH4 475 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 INPP5DQ92835 1189 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 MTBPQ96DY7 904 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 ELMO2Q96JJ3 720 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 CDC6Q99741 560 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 CCDC3Q9BQI4 270 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 IMP3Q9NV31 184 aaKnown RBP12.66□□□□□ -0.38
CCDC42-202ENST00000539522 SENP1Q9P0U3 644 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 TXNDC16Q9P2K2 825 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 CTNNAL1Q9UBT7 734 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 TBK1Q9UHD2 729 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 ADAMTS6Q9UKP5 1117 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 ACTL7BQ9Y614 415 aa12.66□□□□□ -0.38
CCDC42-202ENST00000539522 OR5K4A6NMS3 321 aa12.65□□□□□ -0.38
CCDC42-202ENST00000539522 NTN3O00634 580 aaPredicted RBP12.65□□□□□ -0.38
CCDC42-202ENST00000539522 PHGDHO43175 533 aaKnown RBP12.65□□□□□ -0.38
CCDC42-202ENST00000539522 TOP3BO95985 862 aaKnown RBP12.65□□□□□ -0.38
CCDC42-202ENST00000539522 APOA4P06727 396 aa12.65□□□□□ -0.38
CCDC42-202ENST00000539522 SLC35G4P0C7Q5 338 aa12.65□□□□□ -0.38
CCDC42-202ENST00000539522 FTH1P19P0C7X4 201 aa12.65□□□□□ -0.38
CCDC42-202ENST00000539522 SLC35E2BP0CK96 405 aa12.65□□□□□ -0.38
CCDC42-202ENST00000539522 ZNF37AP17032 561 aaPredicted RBP12.65□□□□□ -0.38
CCDC42-202ENST00000539522 KRT15P19012 456 aa12.65□□□□□ -0.38
CCDC42-202ENST00000539522 CD1CP29017 333 aa12.65□□□□□ -0.38
CCDC42-202ENST00000539522 PPP1CAP62136 330 aa12.65□□□□□ -0.38
CCDC42-202ENST00000539522 CCL7P80098 99 aa12.65□□□□□ -0.38
CCDC42-202ENST00000539522 INSM1Q01101 510 aaPredicted RBP12.65□□□□□ -0.38
CCDC42-202ENST00000539522 TMED2Q15363 201 aa12.65□□□□□ -0.38
CCDC42-202ENST00000539522 ZXDCQ2QGD7 858 aaPredicted RBP12.65□□□□□ -0.38
CCDC42-202ENST00000539522 INAVAQ3KP66 663 aa12.65□□□□□ -0.38
CCDC42-202ENST00000539522 SYTL3Q4VX76 610 aa12.65□□□□□ -0.38
CCDC42-202ENST00000539522 NKAIN2Q5VXU1 208 aa12.65□□□□□ -0.38
CCDC42-202ENST00000539522 ZNF574Q6ZN55 896 aaPredicted RBP12.65□□□□□ -0.38
CCDC42-202ENST00000539522 TMEM26Q6ZUK4 368 aa12.65□□□□□ -0.38
CCDC42-202ENST00000539522 EXOC3L1Q86VI1 746 aa12.65□□□□□ -0.38
CCDC42-202ENST00000539522 FAM76AQ8TAV0 307 aa12.65□□□□□ -0.38
CCDC42-202ENST00000539522 DENND1AQ8TEH3 1009 aa12.65□□□□□ -0.38
CCDC42-202ENST00000539522 TFGQ92734 400 aaPredicted RBP12.65□□□□□ -0.38
CCDC42-202ENST00000539522 ISL2Q96A47 359 aa12.65□□□□□ -0.38
CCDC42-202ENST00000539522 TMEM159Q96B96 161 aa12.65□□□□□ -0.38
CCDC42-202ENST00000539522 POT1Q9NUX5 634 aa12.65□□□□□ -0.38
CCDC42-202ENST00000539522 TMEM9Q9P0T7 183 aa12.65□□□□□ -0.38
CCDC42-202ENST00000539522 CIDEBQ9UHD4 219 aa12.65□□□□□ -0.38
CCDC42-202ENST00000539522 SLC39A10Q9ULF5 831 aa12.65□□□□□ -0.38
CCDC42-202ENST00000539522 WASF3Q9UPY6 502 aa12.65□□□□□ -0.38
CCDC42-202ENST00000539522 CNOT1A5YKK6 2376 aaKnown RBP12.64□□□□□ -0.39
CCDC42-202ENST00000539522 SNRNP200O75643 2136 aaKnown RBP12.64□□□□□ -0.39
CCDC42-202ENST00000539522 IGHV1OR21-1A0A087WYE8 117 aa12.64□□□□□ -0.39
CCDC42-202ENST00000539522 ARHGEF33A8MVX0 844 aa12.64□□□□□ -0.39
CCDC42-202ENST00000539522 E5RI56 91 aa12.64□□□□□ -0.39
CCDC42-202ENST00000539522 F8W8V4 182 aa12.64□□□□□ -0.39
CCDC42-202ENST00000539522 GFYI3L273 518 aa12.64□□□□□ -0.39
CCDC42-202ENST00000539522 POLR3GO15318 223 aaPredicted RBP12.64□□□□□ -0.39
CCDC42-202ENST00000539522 VPS26AO75436 327 aa12.64□□□□□ -0.39
CCDC42-202ENST00000539522 PSIP1O75475 530 aaKnown RBP12.64□□□□□ -0.39
CCDC42-202ENST00000539522 C1orf105O95561 183 aa12.64□□□□□ -0.39
CCDC42-202ENST00000539522 MT-ND3P03897 115 aa12.64□□□□□ -0.39
CCDC42-202ENST00000539522 GP1BAP07359 652 aa12.64□□□□□ -0.39
CCDC42-202ENST00000539522 PNLIPP16233 465 aa12.64□□□□□ -0.39
CCDC42-202ENST00000539522 SAT1P21673 171 aa12.64□□□□□ -0.39
CCDC42-202ENST00000539522 SPRP35270 261 aaPredicted RBP12.64□□□□□ -0.39
CCDC42-202ENST00000539522 BDKRB1P46663 353 aa12.64□□□□□ -0.39
CCDC42-202ENST00000539522 SIM1P81133 766 aaPredicted RBP12.64□□□□□ -0.39
CCDC42-202ENST00000539522 DAB2P98082 770 aa12.64□□□□□ -0.39
CCDC42-202ENST00000539522 IRF9Q00978 393 aa12.64□□□□□ -0.39
CCDC42-202ENST00000539522 POU4F1Q01851 419 aa12.64□□□□□ -0.39
CCDC42-202ENST00000539522 PRKG2Q13237 762 aa12.64□□□□□ -0.39
CCDC42-202ENST00000539522 PPM1JQ5JR12 505 aa12.64□□□□□ -0.39
CCDC42-202ENST00000539522 MROH9Q5TGP6 573 aa12.64□□□□□ -0.39
CCDC42-202ENST00000539522 CDCP2Q5VXM1 449 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms