RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.68□□□□□ -1.02
DDB1-213ENST00000539332 Q6ZVL8 140 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 SYT13Q7L8C5 426 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 NLRP8Q86W28 1048 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 CROCCP3Q8IVE0 287 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 CPNE9Q8IYJ1 553 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 HDDC3Q8N4P3 179 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 MARVELD2Q8N4S9 558 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 CLDN19Q8N6F1 224 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 FAM131CQ96AQ9 280 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 ARPC5LQ9BPX5 153 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 WRAP53Q9BUR4 548 aaKnown RBP8.68□□□□□ -1.02
DDB1-213ENST00000539332 ABCG8Q9H221 673 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 PREBQ9HCU5 417 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 FBXL12Q9NXK8 326 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 C6orf203Q9P0P8 240 aaPredicted RBP8.68□□□□□ -1.02
DDB1-213ENST00000539332 VTI1BQ9UEU0 232 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 PADI4Q9UM07 663 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 SCML1Q9UN30 329 aa8.68□□□□□ -1.02
DDB1-213ENST00000539332 A0A1W2PP55 124 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 TCRBV21S2A2A0A5A6 115 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 NPEPPSL1A6NEC2 478 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 NEMP1O14524 444 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 HDAC3O15379 428 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 GRID2O43424 1007 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 SLC25A14O95258 325 aaPredicted RBP8.67□□□□□ -1.02
DDB1-213ENST00000539332 SOD1P00441 154 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 DNTTP04053 509 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 KITP10721 976 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 NDUFV2P19404 249 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 PRDX6P30041 224 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 IDH3AP50213 366 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 DGKEP52429 567 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 HK3P52790 923 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 TAS2R38P59533 333 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 DPTQ07507 201 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 VAC14Q08AM6 782 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 DCTN2Q13561 401 aaKnown RBP8.67□□□□□ -1.02
DDB1-213ENST00000539332 PPP1R3AQ16821 1122 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 ADAMTSL2Q86TH1 951 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 ALYREFQ86V81 257 aaKnown RBP8.67□□□□□ -1.02
DDB1-213ENST00000539332 RASGRP3Q8IV61 690 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 ZBTB2Q8N680 514 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 CCNYL1Q8N7R7 359 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 PTGR2Q8N8N7 351 aaPredicted RBP8.67□□□□□ -1.02
DDB1-213ENST00000539332 FLCNQ8NFG4 579 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 MAPK15Q8TD08 544 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 TRPC4APQ8TEL6 797 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 SNRNP27Q8WVK2 155 aaKnown RBP8.67□□□□□ -1.02
DDB1-213ENST00000539332 BTN2A2Q8WVV5 523 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 SCAMP4Q969E2 229 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 MOCOSQ96EN8 888 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 SIPA1Q96FS4 1042 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 MPP4Q96JB8 637 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 EBF4Q9BQW3 602 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 RIOK2Q9BVS4 552 aaKnown RBP8.67□□□□□ -1.02
DDB1-213ENST00000539332 CCDC106Q9BWC9 280 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 CYP4F12Q9HCS2 524 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 C2orf42Q9NWW7 574 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 KCTD5Q9NXV2 234 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 NUDT4Q9NZJ9 180 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 ZDHHC2Q9UIJ5 367 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 ITGB1BP2Q9UKP3 347 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 RNF112Q9ULX5 631 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 FADS3Q9Y5Q0 445 aa8.67□□□□□ -1.02
DDB1-213ENST00000539332 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.67□□□□□ -1.02
DDB1-213ENST00000539332 SDK1Q7Z5N4 2213 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 QSOX1O00391 747 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 BTN3A1O00481 513 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 WNT9AO14904 365 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 TSPAN6O43657 245 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 NUAK1O60285 661 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 ATG13O75143 517 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 TNFAIP8O95379 198 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 CLPTM1O96005 669 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 ENO3P13929 434 aaPredicted RBP8.66□□□□□ -1.02
DDB1-213ENST00000539332 ATP1B2P14415 290 aaPredicted RBP8.66□□□□□ -1.02
DDB1-213ENST00000539332 GABRG2P18507 467 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 DGKAP23743 735 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 AOAHP28039 575 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 RGS4P49798 205 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 ALDH18A1P54886 795 aaKnown RBP8.66□□□□□ -1.02
DDB1-213ENST00000539332 INHBCP55103 352 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 ZXDAP98168 799 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 BTKQ06187 659 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 ACOX1Q15067 660 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 ZNF284Q2VY69 593 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 TTLL9Q3SXZ7 439 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 LDLRAP1Q5SW96 308 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 SEL1L3Q68CR1 1132 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 UGT2A3Q6UWM9 527 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 CYHR1Q6ZMK1 362 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 PDPRQ8NCN5 879 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 PJA1Q8NG27 643 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 ACTRT2Q8TDY3 377 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 GANCQ8TET4 914 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 HMGB4Q8WW32 186 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 GLYATL1Q969I3 302 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 CLDN23Q96B33 292 aa8.66□□□□□ -1.02
DDB1-213ENST00000539332 CMTM5Q96DZ9 223 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms