RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 NDOR1Q9UHB4 597 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 FKBPLQ9UIM3 349 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 CRLS1Q9UJA2 301 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 CAPN11Q9UMQ6 739 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 OSGIN2Q9Y236 505 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 LUC7L2Q9Y383 392 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 HCRTR1O43613 425 aa13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 KLHL41O60662 606 aa13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 ZG16O60844 167 aa13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 ALOX12BO75342 701 aa13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 IGHEP01854 428 aa13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 CTSBP07858 339 aa13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 PBX1P40424 430 aa13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 PRLHRP49683 370 aa13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 PER3P56645 1201 aa13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 PRKG2Q13237 762 aa13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 KAZNQ674X7 775 aa13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 MFSD7Q6UXD7 560 aa13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 PID1Q7Z2X4 250 aa13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 ZC3H18Q86VM9 953 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 HOOK3Q86VS8 718 aa13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 AMIGO1Q86WK6 493 aa13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 ZNF567Q8N184 647 aa13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 C19orf47Q8N9M1 422 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 OR2Y1Q8NGV0 311 aa13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 SLC35G2Q8TBE7 412 aa13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 MOCOSQ96EN8 888 aa13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 GBP5Q96PP8 586 aa13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 WDR77Q9BQA1 342 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 SPRTNQ9H040 489 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 FAM96AQ9H5X1 160 aa13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 FAM60AQ9NP50 221 aa13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 IRAK4Q9NWZ3 460 aa13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 DHCR7Q9UBM7 475 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 NOVA2Q9UNW9 492 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 HYOU1Q9Y4L1 999 aa13.54□□□□□ -0.24
SMARCA4-206ENST00000538456 F8P00451 2351 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 C2orf81A6NN90 581 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 IFRD1O00458 451 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 CNOT3O75175 753 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 AGTP01019 485 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 GYPCP04921 128 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 RALBP11234 206 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 DCDP81605 110 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 FANCCQ00597 558 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 MPP3Q13368 585 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 ZIC1Q15915 447 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 SLC18A3Q16572 532 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 RHBDD2Q6NTF9 364 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 SARM1Q6SZW1 724 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 SPESP1Q6UW49 350 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 KCNMB4Q86W47 210 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 ADGRF3Q8IZF5 1079 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 ZNF655Q8N720 491 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 GRHL3Q8TE85 626 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 HAUS1Q96CS2 278 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 FCRL5Q96RD9 977 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 APOL2Q9BQE5 337 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 FICDQ9BVA6 458 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 OR52A5Q9H2C5 316 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 TFB2MQ9H5Q4 396 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 COG4Q9H9E3 785 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 ATP13A2Q9NQ11 1180 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 TXLNGQ9NUQ3 528 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 RSPH14Q9UHP6 348 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 ENTPD4Q9Y227 616 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 AP1M2Q9Y6Q5 423 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 ADGRG4Q8IZF6 3080 aa13.53□□□□□ -0.24
SMARCA4-206ENST00000538456 CELSR1Q9NYQ6 3014 aa13.52□□□□□ -0.24
SMARCA4-206ENST00000538456 GOLGA6L22H0YM25 854 aa13.52□□□□□ -0.25
SMARCA4-206ENST00000538456 CCL22O00626 93 aa13.52□□□□□ -0.25
SMARCA4-206ENST00000538456 E2F3O00716 465 aa13.52□□□□□ -0.25
SMARCA4-206ENST00000538456 ZSCAN9O15535 394 aaPredicted RBP13.52□□□□□ -0.25
SMARCA4-206ENST00000538456 CST8O60676 142 aa13.52□□□□□ -0.25
SMARCA4-206ENST00000538456 MBD3O95983 291 aa13.52□□□□□ -0.25
SMARCA4-206ENST00000538456 UMODP07911 640 aa13.52□□□□□ -0.25
SMARCA4-206ENST00000538456 TMEM253P0C7T8 217 aa13.52□□□□□ -0.25
SMARCA4-206ENST00000538456 PDHA2P29803 388 aa13.52□□□□□ -0.25
SMARCA4-206ENST00000538456 CDKN2BP42772 138 aa13.52□□□□□ -0.25
SMARCA4-206ENST00000538456 NR2C2P49116 596 aa13.52□□□□□ -0.25
SMARCA4-206ENST00000538456 TMPRSS15P98073 1019 aa13.52□□□□□ -0.25
SMARCA4-206ENST00000538456 IQCB1Q15051 598 aa13.52□□□□□ -0.25
SMARCA4-206ENST00000538456 TAF1AQ15573 450 aaPredicted RBP13.52□□□□□ -0.25
SMARCA4-206ENST00000538456 ZRSR2Q15696 482 aaKnown RBP13.52□□□□□ -0.25
SMARCA4-206ENST00000538456 NKAIN1Q4KMZ8 207 aa13.52□□□□□ -0.25
SMARCA4-206ENST00000538456 BZW1Q7L1Q6 419 aaKnown RBP13.52□□□□□ -0.25
SMARCA4-206ENST00000538456 NXPE1Q8N323 547 aa13.52□□□□□ -0.25
SMARCA4-206ENST00000538456 PROKR1Q8TCW9 393 aa13.52□□□□□ -0.25
SMARCA4-206ENST00000538456 PTERQ96BW5 349 aa13.52□□□□□ -0.25
SMARCA4-206ENST00000538456 CNDP1Q96KN2 507 aa13.52□□□□□ -0.25
SMARCA4-206ENST00000538456 AP1M1Q9BXS5 423 aa13.52□□□□□ -0.25
SMARCA4-206ENST00000538456 FBXL4Q9UKA2 621 aa13.52□□□□□ -0.25
SMARCA4-206ENST00000538456 ICKQ9UPZ9 632 aa13.52□□□□□ -0.25
SMARCA4-206ENST00000538456 CFAP99D6REC4 459 aa13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 PRSS44E7EML9 344 aa13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 H3BMH7 237 aa13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 AGPSO00116 658 aa13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 ATP1B2P14415 290 aaPredicted RBP13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 UGT2B7P16662 529 aa13.51□□□□□ -0.25
SMARCA4-206ENST00000538456 SOX8P57073 446 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms