RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 GTF2H4Q92759 462 aa11.93□□□□□ -0.5
CPSF7-218ENST00000537641 RHBDF1Q96CC6 855 aa11.93□□□□□ -0.5
CPSF7-218ENST00000537641 PDLIM5Q96HC4 596 aaKnown RBP11.93□□□□□ -0.5
CPSF7-218ENST00000537641 C8orf48Q96LL4 319 aa11.93□□□□□ -0.5
CPSF7-218ENST00000537641 CEP295NLQ96MC4 621 aa11.93□□□□□ -0.5
CPSF7-218ENST00000537641 CCNB1IP1Q9NPC3 277 aa11.93□□□□□ -0.5
CPSF7-218ENST00000537641 DCAF13Q9NV06 445 aaKnown RBP11.93□□□□□ -0.5
CPSF7-218ENST00000537641 DNMT3BQ9UBC3 853 aaKnown RBP11.93□□□□□ -0.5
CPSF7-218ENST00000537641 TMEFF2Q9UIK5 374 aaPredicted RBP11.93□□□□□ -0.5
CPSF7-218ENST00000537641 ARIH1Q9Y4X5 557 aaPredicted RBP11.93□□□□□ -0.5
CPSF7-218ENST00000537641 ASB1Q9Y576 335 aa11.93□□□□□ -0.5
CPSF7-218ENST00000537641 SPO11Q9Y5K1 396 aa11.93□□□□□ -0.5
CPSF7-218ENST00000537641 TTC3P53804 2025 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 F8W810 466 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 SLC28A1O00337 649 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 RGS14O43566 566 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 NIPSNAP2O75323 286 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 GJB3O75712 270 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 PRKD3O94806 890 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 WDR47O94967 919 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 OAZ2O95190 189 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 NADKO95544 446 aaPredicted RBP11.92□□□□□ -0.5
CPSF7-218ENST00000537641 IL6P05231 212 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 PIRTP0C851 137 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 ACVRL1P37023 503 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 IL5RAQ01344 420 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 PIGFQ07326 219 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 DSC1Q08554 894 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 GTF2H2Q13888 395 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 MAPKAPK3Q16644 382 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 SLC39A12Q504Y0 691 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 HABP4Q5JVS0 413 aaKnown RBP11.92□□□□□ -0.5
CPSF7-218ENST00000537641 C1QTNF12Q5T7M4 302 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 GTF2H2CQ6P1K8 395 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 SHQ1Q6PI26 577 aaKnown RBP11.92□□□□□ -0.5
CPSF7-218ENST00000537641 SLC24A5Q71RS6 500 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 RNF180Q86T96 592 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 ADAMTSL2Q86TH1 951 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 P2RY8Q86VZ1 359 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 CALHM3Q86XJ0 350 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 LACC1Q8IV20 430 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 PLPP6Q8IY26 295 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 CADM3Q8N126 398 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 OR4F6Q8NGB9 312 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 OR10A6Q8NH74 314 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 DYNC2LI1Q8TCX1 351 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 MCOLN3Q8TDD5 553 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 GLMNQ92990 594 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 FUBP3Q96I24 572 aaKnown RBP eCLIP11.92□□□□□ -0.5
CPSF7-218ENST00000537641 RPRD1AQ96P16 312 aaPredicted RBP11.92□□□□□ -0.5
CPSF7-218ENST00000537641 ZNF300Q96RE9 604 aaPredicted RBP11.92□□□□□ -0.5
CPSF7-218ENST00000537641 CCDC90BQ9GZT6 254 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 DUSP21Q9H596 190 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 RETREG1Q9H6L5 497 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 SCN3BQ9NY72 215 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 ANKMY1Q9P2S6 941 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 CCL27Q9Y4X3 112 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 VWA8A3KMH1 1905 aa11.92□□□□□ -0.5
CPSF7-218ENST00000537641 TRBV5-3A0A0A0MS03 114 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 TMEM88BA6NKF7 163 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 GOLGA8CPA6NN73 597 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 OR7A17O14581 309 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 CREG1O75629 220 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 IGLV3-27P01718 113 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 BMP4P12644 408 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 LPOP22079 712 aaPredicted RBP11.91□□□□□ -0.5
CPSF7-218ENST00000537641 FUT4P22083 530 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 NR4A1P22736 598 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 OR1E1P30953 314 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 MAGEA2P43356 314 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 ACLYP53396 1101 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 EFEMP1Q12805 493 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 CDC20Q12834 499 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 ADPRMQ3LIE5 342 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 CYP2U1Q7Z449 544 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 MSRB3Q8IXL7 192 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 HS3ST5Q8IZT8 346 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 LGI2Q8N0V4 545 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 STK40Q8N2I9 435 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 EEF1AKMT1Q8WVE0 214 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 CDK15Q96Q40 435 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 ZIC5Q96T25 663 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 THUMPD3Q9BV44 507 aaKnown RBP11.91□□□□□ -0.5
CPSF7-218ENST00000537641 DPY30Q9C005 99 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 SP140LQ9H930 580 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 ZNF232Q9UNY5 417 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 ISPDA4D126 451 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 E5RI56 91 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 H7C0S8 307 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 B4GALT3O60512 393 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 ERN1O75460 977 aaKnown RBP11.91□□□□□ -0.5
CPSF7-218ENST00000537641 ESR1P03372 595 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 CKBP12277 381 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 ELNP15502 786 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 IGFBP5P24593 272 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 CD40LGP29965 261 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 MC4RP32245 332 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 PTGER3P43115 390 aa11.91□□□□□ -0.5
CPSF7-218ENST00000537641 HNRNPFP52597 415 aaKnown RBP11.91□□□□□ -0.5
CPSF7-218ENST00000537641 RPL38P63173 70 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms