RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 PEPDP12955 493 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 GRK5P34947 590 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 CBLBQ13191 982 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 REP15Q6BDI9 236 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 PAMR1Q6UXH9 720 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 GTPBP3Q969Y2 492 aaKnown RBP10.48□□□□□ -0.73
CLIP1-209ENST00000537178 CAMK1GQ96NX5 476 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 HSD17B14Q9BPX1 270 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 FEM1AQ9BSK4 669 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 PLK2Q9NYY3 685 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 GRHL1Q9NZI5 618 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 RGS17Q9UGC6 210 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-209ENST00000537178 RPL36Q9Y3U8 105 aaKnown RBP10.48□□□□□ -0.73
CLIP1-209ENST00000537178 FOCADQ5VW36 1801 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 CNTNAP1P78357 1384 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 ZNF831Q5JPB2 1677 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 B4GALT5O43286 388 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 RNASEH2AO75792 299 aaKnown RBP10.48□□□□□ -0.73
CLIP1-209ENST00000537178 ESR1P03372 595 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 ANXA8P13928 327 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 IL7RP16871 459 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 S100A2P29034 98 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 CORO1AP31146 461 aaKnown RBP10.48□□□□□ -0.73
CLIP1-209ENST00000537178 CLCN7P51798 805 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 SLC1A5Q15758 541 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 CARTPTQ16568 116 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 PLA2G4EQ3MJ16 856 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 ABCA11PQ4W5N1 156 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 PSRC1Q6PGN9 363 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-209ENST00000537178 ADGRD1Q6QNK2 874 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 ECHDC2Q86YB7 292 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 RASGEF1CQ8N431 466 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 C1orf216Q8TAB5 229 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 ZBED6CLQ96FA7 236 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-209ENST00000537178 SIPA1Q96FS4 1042 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 GAL3ST4Q96RP7 486 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 WDR18Q9BV38 432 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 SSU72Q9NP77 194 aaKnown RBP10.48□□□□□ -0.73
CLIP1-209ENST00000537178 C1orf109Q9NX04 203 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 FBXO9Q9UK97 447 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-209ENST00000537178 TCAF1Q9Y4C2 921 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 COL5A2P05997 1499 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-209ENST00000537178 EME2A4GXA9 379 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-209ENST00000537178 OR2AT4A6NND4 320 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 IQCF5A8MTL0 148 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 PDPK1O15530 556 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 OR1F1O43749 312 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 CLPXO76031 633 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 LYPLA2O95372 231 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 TACR2P21452 398 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 IL12BP29460 328 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 PBX3P40426 434 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 MAGEA12P43365 314 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 TUBA4AP68366 448 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 EFR3AQ14156 821 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 FAM189A2Q15884 450 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 LACTB2Q53H82 288 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-209ENST00000537178 PLEKHG4Q58EX7 1191 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 OTOP3Q7RTS5 596 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 C2orf73Q8N5S3 287 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-209ENST00000537178 PLD5Q8N7P1 536 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 COX18Q8N8Q8 333 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 C15orf40Q8WUR7 153 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 SLC35G5Q96KT7 338 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 IFT27Q9BW83 186 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 MRIQ9BWK5 157 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 LGR4Q9BXB1 951 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 MAGEH1Q9H213 219 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 C14orf105Q9NVL8 296 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 RBMX2Q9Y388 322 aaKnown RBP10.47□□□□□ -0.73
CLIP1-209ENST00000537178 ARFGEF1Q9Y6D6 1849 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 A0A1B0GVM2 712 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 DAPL1A0PJW8 107 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 TCAF2A6NFQ2 919 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 MSI1O43347 362 aaKnown RBP10.47□□□□□ -0.73
CLIP1-209ENST00000537178 HMGN1P05114 100 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 PGAM2P15259 253 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 GBE1Q04446 702 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 RNF220Q5VTB9 566 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 LINGO2Q7L985 606 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 CFAP206Q8IYR0 622 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 AZIN2Q96A70 460 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 PRICKLE1Q96MT3 831 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-209ENST00000537178 C5orf51A6NDU8 294 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 L7N2F9 121 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 CXCR6O00574 342 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 TLL1O43897 1013 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 MFSD11O43934 449 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 POP4O95707 220 aaKnown RBP10.47□□□□□ -0.73
CLIP1-209ENST00000537178 RENP00797 406 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 MT-ND1P03886 318 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 EPHX1P07099 455 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 C8GP07360 202 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 ZNF806P0C7X5 589 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 KHKP50053 298 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 VAMP2P63027 116 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 HSPB3Q12988 150 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 ARFRP1Q13795 201 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 CWF19L1Q69YN2 538 aaKnown RBP10.47□□□□□ -0.73
CLIP1-209ENST00000537178 USP43Q70EL4 1123 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms