RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 UHRF1Q96T88 793 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-202ENST00000536708 RIOK2Q9BVS4 552 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-202ENST00000536708 COPS7BQ9H9Q2 264 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-202ENST00000536708 LTB4R2Q9NPC1 389 aa12.7□□□□□ -0.38
CDK5RAP3-202ENST00000536708 IRAK4Q9NWZ3 460 aa12.7□□□□□ -0.38
CDK5RAP3-202ENST00000536708 FBXL12Q9NXK8 326 aa12.7□□□□□ -0.38
CDK5RAP3-202ENST00000536708 PKD2L2Q9NZM6 624 aa12.7□□□□□ -0.38
CDK5RAP3-202ENST00000536708 MBD1Q9UIS9 605 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-202ENST00000536708 TCRBV3S1A0A5B6 114 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 MAN2B1O00754 1011 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 MTX2O75431 263 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 MTHFD2P13995 350 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 GABRG2P18507 467 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 ITGALP20701 1170 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 GPX3P22352 226 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 MSX2P35548 267 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 CRY1Q16526 586 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 HENMT1Q5T8I9 393 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 PAOXQ6QHF9 649 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 RPS27LQ71UM5 84 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 SNX20Q7Z614 316 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 TECPR1Q7Z6L1 1165 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 SATL1Q86VE3 508 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 RNF148Q8N7C7 305 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 HMGB4Q8WW32 186 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 C19orf60Q96EN9 201 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 COQ10AQ96MF6 247 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 PLEKHG4BQ96PX9 1271 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 OSBPL6Q9BZF3 934 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 LMAN1LQ9HAT1 526 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 SYTL2Q9HCH5 934 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 SPAG4Q9NPE6 437 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 ADA2Q9NZK5 511 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 CRLS1Q9UJA2 301 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 CROTQ9UKG9 612 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 FIS1Q9Y3D6 152 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 C15orf38-AP3S2A0A0A6YYH1 394 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 TRBV5-4A0A0C4DH59 114 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 TXNDC9O14530 226 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 MRASO14807 208 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 RECQL5O94762 991 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 CDK14O94921 469 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 DNTTP04053 509 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 PYGLP06737 847 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 MRPL19P49406 292 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 SH3BP2P78314 561 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 PRKCQQ04759 706 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 MAP7Q14244 749 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 EOGTQ5NDL2 527 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 CTSL3PQ5NE16 218 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 SAMD4BQ5PRF9 694 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 ZNF648Q5T619 568 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 ARPINQ7Z6K5 226 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 RAB44Q7Z6P3 723 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 FUNDC1Q8IVP5 155 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 CBARPQ8N350 705 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 CLDN19Q8N6F1 224 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 KLK6Q92876 244 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 FUBP1Q96AE4 644 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 DTD2Q96FN9 168 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 SIPA1Q96FS4 1042 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 BIRC8Q96P09 236 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 HHIPQ96QV1 700 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 TCF12Q99081 682 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 GPATCH1Q9BRR8 931 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 DERL2Q9GZP9 239 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 TBC1D17Q9HA65 648 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 PTTG2Q9NZH5 202 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 CCDC167Q9P0B6 97 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 WNT16Q9UBV4 365 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 APPL1Q9UKG1 709 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 MED16Q9Y2X0 877 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 AP4S1Q9Y587 144 aa12.69□□□□□ -0.38
CDK5RAP3-202ENST00000536708 TECTAO75443 2155 aa12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 KANSL1LA0AUZ9 987 aa12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 PRORSD1PA6NEY8 169 aa12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 FAM170BA6NMN3 283 aa12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 IQCF5A8MTL0 148 aa12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 NIPSNAP2O75323 286 aa12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 PCDH8O95206 1070 aa12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 MATN4O95460 622 aa12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 SOD1P00441 154 aa12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 ZNF26P17031 533 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 CD9P21926 228 aa12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 ACRV1P26436 265 aa12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 SLC7A1P30825 629 aa12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 FMO4P31512 558 aa12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 ADPRHP54922 357 aa12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 STX1BP61266 288 aa12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 B4GALNT1Q00973 533 aa12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 OR4D1Q15615 310 aa12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 KANK2Q63ZY3 851 aa12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 CLEC6AQ6EIG7 209 aa12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 TRIM74Q86UV6 250 aa12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 PHYKPLQ8IUZ5 450 aa12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 NXPE1Q8N323 547 aa12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 PTGR2Q8N8N7 351 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 KIAA1191Q96A73 305 aa12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 NUS1Q96E22 293 aa12.68□□□□□ -0.38
CDK5RAP3-202ENST00000536708 C3orf30Q96M34 536 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms