RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 ZNF385DQ9H6B1 395 aa23.25■■□□□ 1.31
PTPMT1-205ENST00000534775 MBNL1Q9NR56 388 aaKnown RBP23.25■■□□□ 1.31
PTPMT1-205ENST00000534775 ZNF225Q9UK10 706 aa23.25■■□□□ 1.31
PTPMT1-205ENST00000534775 TMEM98Q9Y2Y6 226 aa23.25■■□□□ 1.31
PTPMT1-205ENST00000534775 DNMT3AQ9Y6K1 912 aaPredicted RBP23.25■■□□□ 1.31
PTPMT1-205ENST00000534775 MYO10Q9HD67 2058 aa23.25■■□□□ 1.31
PTPMT1-205ENST00000534775 A0A1B0GTL3 188 aa23.24■■□□□ 1.31
PTPMT1-205ENST00000534775 KLHL33A6NCF5 533 aa23.24■■□□□ 1.31
PTPMT1-205ENST00000534775 PIP5K1BO14986 540 aa23.24■■□□□ 1.31
PTPMT1-205ENST00000534775 OR4F21O95013 312 aa23.24■■□□□ 1.31
PTPMT1-205ENST00000534775 PRDX3P30048 256 aaKnown RBP23.24■■□□□ 1.31
PTPMT1-205ENST00000534775 DOK6Q6PKX4 331 aa23.24■■□□□ 1.31
PTPMT1-205ENST00000534775 TMEM92Q6UXU6 159 aa23.24■■□□□ 1.31
PTPMT1-205ENST00000534775 ATL1Q8WXF7 558 aa23.24■■□□□ 1.31
PTPMT1-205ENST00000534775 FBXL8Q96CD0 374 aa23.24■■□□□ 1.31
PTPMT1-205ENST00000534775 BTBD10Q9BSF8 475 aa23.24■■□□□ 1.31
PTPMT1-205ENST00000534775 OSBPL6Q9BZF3 934 aa23.24■■□□□ 1.31
PTPMT1-205ENST00000534775 NDRG2Q9UN36 371 aaKnown RBP23.24■■□□□ 1.31
PTPMT1-205ENST00000534775 TCRBV21S2A2A0A5A6 115 aa23.23■■□□□ 1.31
PTPMT1-205ENST00000534775 UBDO15205 165 aa23.23■■□□□ 1.31
PTPMT1-205ENST00000534775 EZRP15311 586 aaKnown RBP23.23■■□□□ 1.31
PTPMT1-205ENST00000534775 NDUFV2P19404 249 aa23.23■■□□□ 1.31
PTPMT1-205ENST00000534775 ERVPABLB-1P60509 514 aa23.23■■□□□ 1.31
PTPMT1-205ENST00000534775 KCNJ2P63252 427 aa23.23■■□□□ 1.31
PTPMT1-205ENST00000534775 NAA25Q14CX7 972 aa23.23■■□□□ 1.31
PTPMT1-205ENST00000534775 ZNF852Q6ZMS4 543 aa23.23■■□□□ 1.31
PTPMT1-205ENST00000534775 LARP4Q71RC2 724 aaKnown RBP eCLIP23.23■■□□□ 1.316e-6■□□□□ 9.2
PTPMT1-205ENST00000534775 MILR1Q7Z6M3 343 aa23.23■■□□□ 1.31
PTPMT1-205ENST00000534775 LILRA3Q8N6C8 439 aaPredicted RBP23.23■■□□□ 1.31
PTPMT1-205ENST00000534775 CFAP61Q8NHU2 1237 aa23.23■■□□□ 1.31
PTPMT1-205ENST00000534775 KLK6Q92876 244 aa23.23■■□□□ 1.31
PTPMT1-205ENST00000534775 CCDC138Q96M89 665 aa23.23■■□□□ 1.31
PTPMT1-205ENST00000534775 GUCD1Q96NT3 240 aa23.23■■□□□ 1.31
PTPMT1-205ENST00000534775 DPEP2Q9H4A9 486 aa23.23■■□□□ 1.31
PTPMT1-205ENST00000534775 KLC4Q9NSK0 619 aa23.23■■□□□ 1.31
PTPMT1-205ENST00000534775 GULP1Q9UBP9 304 aa23.23■■□□□ 1.31
PTPMT1-205ENST00000534775 UNC80Q8N2C7 3258 aa23.23■■□□□ 1.31
PTPMT1-205ENST00000534775 ARHGEF33A8MVX0 844 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 GYG2O15488 501 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 GDF5P43026 501 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 TRAF3Q13114 568 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 RPA4Q13156 261 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 TMEM198Q66K66 360 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 LETMD1Q6P1Q0 360 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 CDYL2Q8N8U2 506 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 FBXO15Q8NCQ5 510 aaPredicted RBP23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 OR4F6Q8NGB9 312 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 NTMT1Q9BV86 223 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 LGR4Q9BXB1 951 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 G3BP2Q9UN86 482 aaKnown RBP23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 DUSP12Q9UNI6 340 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 TIMM22Q9Y584 194 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 B2RBV5 119 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 EBLN1P0CF75 366 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 MYCLP1P12525 358 aaPredicted RBP23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 CD72P21854 359 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 PDHA2P29803 388 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 SLC6A12P48065 614 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 IRX1P78414 480 aaPredicted RBP23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 C11orf96Q7Z7L8 435 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 AMZ2Q86W34 360 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 METTL6Q8TCB7 284 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 C3orf30Q96M34 536 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 TUBB1Q9H4B7 451 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 POLMQ9NP87 494 aaPredicted RBP23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 RIC8BQ9NVN3 520 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 TRPS1Q9UHF7 1281 aa23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 COPG1Q9Y678 874 aaKnown RBP23.22■■□□□ 1.31
PTPMT1-205ENST00000534775 ZFC3H1O60293 1989 aaKnown RBP23.21■■□□□ 1.31
PTPMT1-205ENST00000534775 LOC730098B7Z3J9 87 aa23.21■■□□□ 1.31
PTPMT1-205ENST00000534775 KMOO15229 486 aa23.21■■□□□ 1.31
PTPMT1-205ENST00000534775 THRAP10827 490 aa23.21■■□□□ 1.31
PTPMT1-205ENST00000534775 HGFP14210 728 aa23.21■■□□□ 1.31
PTPMT1-205ENST00000534775 PIK3R1P27986 724 aa23.21■■□□□ 1.31
PTPMT1-205ENST00000534775 SQLEQ14534 574 aa23.21■■□□□ 1.31
PTPMT1-205ENST00000534775 RINLQ6ZS11 566 aa23.21■■□□□ 1.31
PTPMT1-205ENST00000534775 FAM124AQ86V42 546 aa23.21■■□□□ 1.31
PTPMT1-205ENST00000534775 OXR1Q8N573 874 aa23.21■■□□□ 1.31
PTPMT1-205ENST00000534775 FOXJ1Q92949 421 aa23.21■■□□□ 1.31
PTPMT1-205ENST00000534775 TUBGCP3Q96CW5 907 aa23.21■■□□□ 1.31
PTPMT1-205ENST00000534775 CDK15Q96Q40 435 aa23.21■■□□□ 1.31
PTPMT1-205ENST00000534775 TBC1D10AQ9BXI6 508 aa23.21■■□□□ 1.31
PTPMT1-205ENST00000534775 C1orf21Q9H246 121 aa23.21■■□□□ 1.31
PTPMT1-205ENST00000534775 AKTIPQ9H8T0 292 aa23.21■■□□□ 1.31
PTPMT1-205ENST00000534775 BTRCQ9Y297 605 aa23.21■■□□□ 1.31
PTPMT1-205ENST00000534775 OR1A2Q9Y585 309 aa23.21■■□□□ 1.31
PTPMT1-205ENST00000534775 ST14Q9Y5Y6 855 aa23.21■■□□□ 1.31
PTPMT1-205ENST00000534775 PRUNE2Q8WUY3 3088 aa23.2■■□□□ 1.3
PTPMT1-205ENST00000534775 ATP6AP2A0A1C7CYW4 349 aa23.2■■□□□ 1.3
PTPMT1-205ENST00000534775 ATP6AP2O75787 350 aa23.2■■□□□ 1.3
PTPMT1-205ENST00000534775 WDR47O94967 919 aa23.2■■□□□ 1.3
PTPMT1-205ENST00000534775 CAPN1P07384 714 aa23.2■■□□□ 1.3
PTPMT1-205ENST00000534775 LINC00032P0C843 101 aa23.2■■□□□ 1.3
PTPMT1-205ENST00000534775 COX4I1P13073 169 aa23.2■■□□□ 1.3
PTPMT1-205ENST00000534775 GABRG2P18507 467 aa23.2■■□□□ 1.3
PTPMT1-205ENST00000534775 HMOX2P30519 316 aa23.2■■□□□ 1.3
PTPMT1-205ENST00000534775 CPA2P48052 419 aa23.2■■□□□ 1.3
PTPMT1-205ENST00000534775 ATP4BP51164 291 aa23.2■■□□□ 1.3
PTPMT1-205ENST00000534775 MXRA7P84157 204 aa23.2■■□□□ 1.3
PTPMT1-205ENST00000534775 HERC3Q15034 1050 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms