RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 UBAP2Q5T6F2 1119 aaKnown RBP23.54■■□□□ 1.36
SIPA1-210ENST00000534406 KLHL35Q6PF15 583 aa23.54■■□□□ 1.36
SIPA1-210ENST00000534406 NEK10Q6ZWH5 1172 aa23.54■■□□□ 1.36
SIPA1-210ENST00000534406 DCUN1D3Q8IWE4 304 aa23.54■■□□□ 1.36
SIPA1-210ENST00000534406 UBXN4Q92575 508 aa23.54■■□□□ 1.36
SIPA1-210ENST00000534406 CYTH2Q99418 400 aa23.54■■□□□ 1.36
SIPA1-210ENST00000534406 RBBP8Q99708 897 aa23.54■■□□□ 1.36
SIPA1-210ENST00000534406 MCMBPQ9BTE3 642 aa23.54■■□□□ 1.36
SIPA1-210ENST00000534406 SCNM1Q9BWG6 230 aa23.54■■□□□ 1.36
SIPA1-210ENST00000534406 FUT8Q9BYC5 575 aa23.54■■□□□ 1.36
SIPA1-210ENST00000534406 ACSS3Q9H6R3 686 aa23.54■■□□□ 1.36
SIPA1-210ENST00000534406 POLG2Q9UHN1 485 aa23.54■■□□□ 1.36
SIPA1-210ENST00000534406 VWA7Q9Y334 891 aa23.54■■□□□ 1.36
SIPA1-210ENST00000534406 EIF3FO00303 357 aaPredicted RBP23.53■■□□□ 1.36
SIPA1-210ENST00000534406 FAM153BP0C7A2 387 aa23.53■■□□□ 1.36
SIPA1-210ENST00000534406 SPINK2P20155 84 aa23.53■■□□□ 1.36
SIPA1-210ENST00000534406 MCM3P25205 808 aa23.53■■□□□ 1.36
SIPA1-210ENST00000534406 TIAL1Q01085 375 aaKnown RBP eCLIP23.53■■□□□ 1.36
SIPA1-210ENST00000534406 TARDBPQ13148 414 aaKnown RBP eCLIP23.53■■□□□ 1.36
SIPA1-210ENST00000534406 PRKG2Q13237 762 aa23.53■■□□□ 1.36
SIPA1-210ENST00000534406 KLHL38Q2WGJ6 581 aa23.53■■□□□ 1.36
SIPA1-210ENST00000534406 FAM153CQ494X1 144 aa23.53■■□□□ 1.36
SIPA1-210ENST00000534406 WDR74Q6RFH5 385 aaPredicted RBP23.53■■□□□ 1.36
SIPA1-210ENST00000534406 TRMT10CQ7L0Y3 403 aaKnown RBP23.53■■□□□ 1.36
SIPA1-210ENST00000534406 CPNE9Q8IYJ1 553 aa23.53■■□□□ 1.36
SIPA1-210ENST00000534406 OR52E1Q8NGJ3 308 aa23.53■■□□□ 1.36
SIPA1-210ENST00000534406 LCN9Q8WX39 176 aa23.53■■□□□ 1.36
SIPA1-210ENST00000534406 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.53■■□□□ 1.36
SIPA1-210ENST00000534406 NCSTNQ92542 709 aa23.53■■□□□ 1.36
SIPA1-210ENST00000534406 RSC1A1Q92681 617 aa23.53■■□□□ 1.36
SIPA1-210ENST00000534406 TMEM74Q96NL1 305 aa23.53■■□□□ 1.36
SIPA1-210ENST00000534406 OLFM1Q99784 485 aa23.53■■□□□ 1.36
SIPA1-210ENST00000534406 OGFRQ9NZT2 677 aa23.53■■□□□ 1.36
SIPA1-210ENST00000534406 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.53■■□□□ 1.36
SIPA1-210ENST00000534406 RUVBL2Q9Y230 463 aaKnown RBP23.53■■□□□ 1.36
SIPA1-210ENST00000534406 NEUROG3Q9Y4Z2 214 aa23.53■■□□□ 1.36
SIPA1-210ENST00000534406 V9GYY5 206 aaPredicted RBP23.53■■□□□ 1.36
SIPA1-210ENST00000534406 KDM1AO60341 852 aa23.52■■□□□ 1.36
SIPA1-210ENST00000534406 MPC1LP0DKB6 136 aa23.52■■□□□ 1.36
SIPA1-210ENST00000534406 RGS4P49798 205 aa23.52■■□□□ 1.36
SIPA1-210ENST00000534406 PMS2P54278 862 aa23.52■■□□□ 1.36
SIPA1-210ENST00000534406 SHC2P98077 582 aa23.52■■□□□ 1.36
SIPA1-210ENST00000534406 CFHR1Q03591 330 aa23.52■■□□□ 1.36
SIPA1-210ENST00000534406 LRRC8EQ6NSJ5 796 aa23.52■■□□□ 1.36
SIPA1-210ENST00000534406 TMPRSS9Q7Z410 1059 aa23.52■■□□□ 1.36
SIPA1-210ENST00000534406 B3GNT8Q7Z7M8 397 aa23.52■■□□□ 1.36
SIPA1-210ENST00000534406 OOSP2Q86WS3 158 aa23.52■■□□□ 1.36
SIPA1-210ENST00000534406 SLITRK4Q8IW52 837 aa23.52■■□□□ 1.36
SIPA1-210ENST00000534406 OR4D9Q8NGE8 314 aa23.52■■□□□ 1.36
SIPA1-210ENST00000534406 GRAMD1AQ96CP6 724 aa23.52■■□□□ 1.36
SIPA1-210ENST00000534406 TFB2MQ9H5Q4 396 aaKnown RBP23.52■■□□□ 1.36
SIPA1-210ENST00000534406 TDRKHQ9Y2W6 561 aaKnown RBP23.52■■□□□ 1.36
SIPA1-210ENST00000534406 NFS1Q9Y697 457 aa23.52■■□□□ 1.36
SIPA1-210ENST00000534406 MN1Q10571 1320 aaPredicted RBP23.52■■□□□ 1.36
SIPA1-210ENST00000534406 CEP295Q9C0D2 2601 aa23.51■■□□□ 1.35
SIPA1-210ENST00000534406 FAM221BA6H8Z2 402 aa23.51■■□□□ 1.35
SIPA1-210ENST00000534406 TMX2-CTNND1H3BSU7 103 aa23.51■■□□□ 1.35
SIPA1-210ENST00000534406 ABHD2P08910 425 aa23.51■■□□□ 1.35
SIPA1-210ENST00000534406 CCKBRP32239 447 aa23.51■■□□□ 1.35
SIPA1-210ENST00000534406 SPRP35270 261 aaPredicted RBP23.51■■□□□ 1.35
SIPA1-210ENST00000534406 CCNFP41002 786 aa23.51■■□□□ 1.35
SIPA1-210ENST00000534406 LIMK2P53671 638 aa23.51■■□□□ 1.35
SIPA1-210ENST00000534406 INHBCP55103 352 aa23.51■■□□□ 1.35
SIPA1-210ENST00000534406 GRTP1Q5TC63 336 aa23.51■■□□□ 1.35
SIPA1-210ENST00000534406 TMEM71Q6P5X7 295 aa23.51■■□□□ 1.35
SIPA1-210ENST00000534406 TTC23LQ6PF05 361 aa23.51■■□□□ 1.35
SIPA1-210ENST00000534406 PAQR3Q6TCH7 311 aa23.51■■□□□ 1.35
SIPA1-210ENST00000534406 MARCH9Q86YJ5 346 aa23.51■■□□□ 1.35
SIPA1-210ENST00000534406 PLXDC1Q8IUK5 500 aa23.51■■□□□ 1.35
SIPA1-210ENST00000534406 SPNS2Q8IVW8 549 aa23.51■■□□□ 1.35
SIPA1-210ENST00000534406 GPR22Q99680 433 aa23.51■■□□□ 1.35
SIPA1-210ENST00000534406 TXLNGYQ9BZA5 131 aa23.51■■□□□ 1.35
SIPA1-210ENST00000534406 STRADBQ9C0K7 418 aa23.51■■□□□ 1.35
SIPA1-210ENST00000534406 SRMSQ9H3Y6 488 aa23.51■■□□□ 1.35
SIPA1-210ENST00000534406 ANGPTL2Q9UKU9 493 aa23.51■■□□□ 1.35
SIPA1-210ENST00000534406 ENTPD2Q9Y5L3 495 aa23.51■■□□□ 1.35
SIPA1-210ENST00000534406 A0A087WUV0 522 aaPredicted RBP23.5■■□□□ 1.35
SIPA1-210ENST00000534406 OR5K3A6NET4 321 aa23.5■■□□□ 1.35
SIPA1-210ENST00000534406 MATN4O95460 622 aa23.5■■□□□ 1.35
SIPA1-210ENST00000534406 HOXB3P14651 431 aaPredicted RBP23.5■■□□□ 1.35
SIPA1-210ENST00000534406 SAT1P21673 171 aa23.5■■□□□ 1.35
SIPA1-210ENST00000534406 SHMT2P34897 504 aa23.5■■□□□ 1.35
SIPA1-210ENST00000534406 BDKRB1P46663 353 aa23.5■■□□□ 1.35
SIPA1-210ENST00000534406 SLC12A2P55011 1212 aa23.5■■□□□ 1.35
SIPA1-210ENST00000534406 VSNL1P62760 191 aa23.5■■□□□ 1.35
SIPA1-210ENST00000534406 PHF19Q5T6S3 580 aa23.5■■□□□ 1.35
SIPA1-210ENST00000534406 CCNI2Q6ZMN8 369 aaPredicted RBP23.5■■□□□ 1.35
SIPA1-210ENST00000534406 OR4E2Q8NGC2 313 aa23.5■■□□□ 1.35
SIPA1-210ENST00000534406 MAGEC3Q8TD91 643 aa23.5■■□□□ 1.35
SIPA1-210ENST00000534406 CCDC74BQ96LY2 380 aa23.5■■□□□ 1.35
SIPA1-210ENST00000534406 SEMA6CQ9H3T2 930 aa23.5■■□□□ 1.35
SIPA1-210ENST00000534406 TMEM9Q9P0T7 183 aa23.5■■□□□ 1.35
SIPA1-210ENST00000534406 ICKQ9UPZ9 632 aa23.5■■□□□ 1.35
SIPA1-210ENST00000534406 IGHV5-10-1A0A0J9YXX1 117 aa23.49■■□□□ 1.35
SIPA1-210ENST00000534406 CATP04040 527 aaKnown RBP23.49■■□□□ 1.35
SIPA1-210ENST00000534406 THRAP10827 490 aa23.49■■□□□ 1.35
SIPA1-210ENST00000534406 GFERP55789 205 aa23.49■■□□□ 1.35
SIPA1-210ENST00000534406 TAS2R39P59534 338 aa23.49■■□□□ 1.35
SIPA1-210ENST00000534406 POU4F1Q01851 419 aa23.49■■□□□ 1.35
SIPA1-210ENST00000534406 ZFP36L1Q07352 338 aaKnown RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms