RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 P4HA1P13674 534 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 HPGDP15428 266 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 ABCB4P21439 1286 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 CDH3P22223 829 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 SLC26A3P40879 764 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 PCP4P48539 62 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 HARS2P49590 506 aaKnown RBP4.22□□□□□ -1.73
ITGB1-219ENST00000534049 EIF2B2P49770 351 aaKnown RBP4.22□□□□□ -1.73
ITGB1-219ENST00000534049 ENTPD1P49961 510 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 GDI2P50395 445 aaKnown RBP4.22□□□□□ -1.73
ITGB1-219ENST00000534049 ARHGDIBP52566 201 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 NUP107P57740 925 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 RPS3AP61247 264 aaKnown RBP4.22□□□□□ -1.73
ITGB1-219ENST00000534049 XIAPP98170 497 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 TFAP4Q01664 338 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 ROR1Q01973 937 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 GUCY2DQ02846 1103 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 GFPT1Q06210 699 aaPredicted RBP4.22□□□□□ -1.73
ITGB1-219ENST00000534049 CDC20Q12834 499 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 SF3A3Q12874 501 aaKnown RBP eCLIP4.22□□□□□ -1.73
ITGB1-219ENST00000534049 STX3Q13277 289 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 PPP2R5CQ13362 524 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 ME3Q16798 604 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 C5orf22Q49AR2 442 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 IGSF11Q5DX21 431 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 AGBL2Q5U5Z8 902 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 ATL3Q6DD88 541 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 IL31Q6EBC2 164 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 ARMCX5Q6P1M9 558 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 PLBD1Q6P4A8 553 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 KLHL35Q6PF15 583 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 OLFM4Q6UX06 510 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 RTL10Q7L3V2 364 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 MREGQ8N565 214 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 CPSF7Q8N684 471 aaKnown RBP4.22□□□□□ -1.73
ITGB1-219ENST00000534049 NATD1Q8N6N6 113 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 DNAAF3Q8N9W5 541 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 TTLQ8NG68 377 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 AENQ8WTP8 325 aaKnown RBP4.22□□□□□ -1.73
ITGB1-219ENST00000534049 DDI1Q8WTU0 396 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 WASF1Q92558 559 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 KLHL29Q96CT2 875 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 EID2BQ96D98 161 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 RBM18Q96H35 190 aaKnown RBP4.22□□□□□ -1.73
ITGB1-219ENST00000534049 SLC39A13Q96H72 371 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 ZNF333Q96JL9 665 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 CNDP2Q96KP4 475 aaKnown RBP4.22□□□□□ -1.73
ITGB1-219ENST00000534049 ADAD1Q96M93 576 aaKnown RBP4.22□□□□□ -1.73
ITGB1-219ENST00000534049 PPP1R10Q96QC0 940 aaKnown RBP4.22□□□□□ -1.73
ITGB1-219ENST00000534049 BBS4Q96RK4 519 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 NUDCD1Q96RS6 583 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 NAPGQ99747 312 aaPredicted RBP4.22□□□□□ -1.73
ITGB1-219ENST00000534049 ELAC2Q9BQ52 826 aaKnown RBP4.22□□□□□ -1.73
ITGB1-219ENST00000534049 AP1M1Q9BXS5 423 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 CALN1Q9BXU9 219 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 GON7Q9BXV9 100 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 EDEM3Q9BZQ6 932 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 CCSER1Q9C0I3 900 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 KCNN2Q9H2S1 579 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 EHD1Q9H4M9 534 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 MROH8Q9H579 483 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 SH2D4AQ9H788 454 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 SP140LQ9H930 580 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 KRCC1Q9NPI7 259 aaPredicted RBP4.22□□□□□ -1.73
ITGB1-219ENST00000534049 IARS2Q9NSE4 1012 aaKnown RBP4.22□□□□□ -1.73
ITGB1-219ENST00000534049 SIRT3Q9NTG7 399 aaPredicted RBP4.22□□□□□ -1.73
ITGB1-219ENST00000534049 ETNK2Q9NVF9 386 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 TMLHEQ9NVH6 421 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 PAQR5Q9NXK6 330 aaPredicted RBP4.22□□□□□ -1.73
ITGB1-219ENST00000534049 ADAM22Q9P0K1 906 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 TBC1D14Q9P2M4 693 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 UBA2Q9UBT2 640 aaPredicted RBP4.22□□□□□ -1.73
ITGB1-219ENST00000534049 NUP50Q9UKX7 468 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 CLEC4AQ9UMR7 237 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 MAGED2Q9UNF1 606 aaPredicted RBP4.22□□□□□ -1.73
ITGB1-219ENST00000534049 STX8Q9UNK0 236 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 GTF2A1LQ9UNN4 478 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 DTX4Q9Y2E6 619 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 STK38LQ9Y2H1 464 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 USP16Q9Y5T5 823 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 COPG1Q9Y678 874 aaKnown RBP4.22□□□□□ -1.73
ITGB1-219ENST00000534049 KIF13BQ9NQT8 1826 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 TTC3P53804 2025 aa4.22□□□□□ -1.73
ITGB1-219ENST00000534049 ATP10DQ9P241 1426 aa4.21□□□□□ -1.73
ITGB1-219ENST00000534049 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.21□□□□□ -1.74
ITGB1-219ENST00000534049 ZSCAN5BA6NJL1 495 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 TRPC5OSA6NMA1 111 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 SLC38A8A6NNN8 435 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 PRR23D1E9PI22 279 aaPredicted RBP4.21□□□□□ -1.74
ITGB1-219ENST00000534049 VWA5AO00534 786 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 TNFRSF13BO14836 293 aaPredicted RBP4.21□□□□□ -1.74
ITGB1-219ENST00000534049 MAPK13O15264 365 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 RAD51BO15315 384 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 FFAR2O15552 330 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 ASNA1O43681 348 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 CRTAPO75718 401 aaPredicted RBP4.21□□□□□ -1.74
ITGB1-219ENST00000534049 NEURL1O76050 574 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 SNAPINO95295 136 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 HLA-DQA2P01906 255 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 NGFRP08138 427 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms