RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 TAAR9Q96RI9 348 aa19.88■□□□□ 0.77
CCS-208ENST00000533244 DDA1Q9BW61 102 aa19.88■□□□□ 0.77
CCS-208ENST00000533244 FOXJ2Q9P0K8 574 aa19.88■□□□□ 0.77
CCS-208ENST00000533244 WHRNQ9P202 907 aa19.88■□□□□ 0.77
CCS-208ENST00000533244 OR6C74A6NCV1 312 aa19.87■□□□□ 0.77
CCS-208ENST00000533244 TPBGLP0DKB5 382 aa19.87■□□□□ 0.77
CCS-208ENST00000533244 UNC5AQ6ZN44 842 aa19.87■□□□□ 0.77
CCS-208ENST00000533244 FAM92BQ6ZTR7 304 aa19.87■□□□□ 0.77
CCS-208ENST00000533244 CNTN4Q8IWV2 1026 aa19.87■□□□□ 0.77
CCS-208ENST00000533244 OR4E2Q8NGC2 313 aa19.87■□□□□ 0.77
CCS-208ENST00000533244 UBXN4Q92575 508 aa19.87■□□□□ 0.77
CCS-208ENST00000533244 ART4Q93070 314 aa19.87■□□□□ 0.77
CCS-208ENST00000533244 DCBLD2Q96PD2 775 aa19.87■□□□□ 0.77
CCS-208ENST00000533244 TRIT1Q9H3H1 467 aaKnown RBP19.87■□□□□ 0.77
CCS-208ENST00000533244 FBXO6Q9NRD1 293 aaPredicted RBP19.87■□□□□ 0.77
CCS-208ENST00000533244 GRHL1Q9NZI5 618 aa19.87■□□□□ 0.77
CCS-208ENST00000533244 POLG2Q9UHN1 485 aa19.87■□□□□ 0.77
CCS-208ENST00000533244 FBXO5Q9UKT4 447 aa19.87■□□□□ 0.77
CCS-208ENST00000533244 ICKQ9UPZ9 632 aa19.87■□□□□ 0.77
CCS-208ENST00000533244 CHMP2BQ9UQN3 213 aa19.87■□□□□ 0.77
CCS-208ENST00000533244 SSUH2Q9Y2M2 353 aa19.87■□□□□ 0.77
CCS-208ENST00000533244 MED16Q9Y2X0 877 aa19.87■□□□□ 0.77
CCS-208ENST00000533244 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.86■□□□□ 0.77
CCS-208ENST00000533244 RRP8O43159 456 aaKnown RBP19.86■□□□□ 0.77
CCS-208ENST00000533244 URI1O94763 535 aaPredicted RBP19.86■□□□□ 0.77
CCS-208ENST00000533244 F7P08709 466 aaPredicted RBP19.86■□□□□ 0.77
CCS-208ENST00000533244 RAB15P59190 212 aa19.86■□□□□ 0.77
CCS-208ENST00000533244 PRKG2Q13237 762 aa19.86■□□□□ 0.77
CCS-208ENST00000533244 FRG1Q14331 258 aaKnown RBP19.86■□□□□ 0.77
CCS-208ENST00000533244 WHAMMP3Q1A5X7 153 aa19.86■□□□□ 0.77
CCS-208ENST00000533244 CACHD1Q5VU97 1274 aa19.86■□□□□ 0.77
CCS-208ENST00000533244 ZNF549Q6P9A3 640 aa19.86■□□□□ 0.77
CCS-208ENST00000533244 UNC5DQ6UXZ4 953 aa19.86■□□□□ 0.77
CCS-208ENST00000533244 OTOAQ7RTW8 1153 aa19.86■□□□□ 0.77
CCS-208ENST00000533244 FAM129CQ86XR2 697 aa19.86■□□□□ 0.77
CCS-208ENST00000533244 CARFQ8N187 725 aa19.86■□□□□ 0.77
CCS-208ENST00000533244 C2CD4AQ8NCU7 369 aaPredicted RBP19.86■□□□□ 0.77
CCS-208ENST00000533244 CERS2Q96G23 380 aa19.86■□□□□ 0.77
CCS-208ENST00000533244 SLC41A2Q96JW4 573 aa19.86■□□□□ 0.77
CCS-208ENST00000533244 NRTNQ99748 197 aa19.86■□□□□ 0.77
CCS-208ENST00000533244 DPH5Q9H2P9 285 aa19.86■□□□□ 0.77
CCS-208ENST00000533244 SRMSQ9H3Y6 488 aa19.86■□□□□ 0.77
CCS-208ENST00000533244 FBXO8Q9NRD0 319 aa19.86■□□□□ 0.77
CCS-208ENST00000533244 IARS2Q9NSE4 1012 aaKnown RBP19.86■□□□□ 0.77
CCS-208ENST00000533244 ZC3H7BQ9UGR2 993 aaKnown RBP19.86■□□□□ 0.77
CCS-208ENST00000533244 POMT2Q9UKY4 750 aa19.86■□□□□ 0.77
CCS-208ENST00000533244 ITPR1Q14643 2758 aa19.86■□□□□ 0.77
CCS-208ENST00000533244 IGHV5-51A0A0C4DH38 117 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 TLCD2A6NGC4 264 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 KIF2AO00139 706 aaPredicted RBP19.85■□□□□ 0.77
CCS-208ENST00000533244 MATN2O00339 956 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 BTN3A3O00478 584 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 RASSF9O75901 435 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 ERVK-10P10266 1014 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 CD82P27701 267 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 ATP5DP30049 168 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 KPNA2P52292 529 aaKnown RBP19.85■□□□□ 0.77
CCS-208ENST00000533244 MPP1Q00013 466 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 DNTTIP2Q5QJE6 756 aaKnown RBP19.85■□□□□ 0.77
CCS-208ENST00000533244 TMEM164Q5U3C3 297 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 AMIGO1Q86WK6 493 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 SPACA3Q8IXA5 215 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 KCNE4Q8WWG9 221 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 KCNJ9Q92806 393 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 MAP3K3Q99759 626 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 DPH1Q9BZG8 443 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 SLC39A1Q9NY26 324 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 GALPQ9UBC7 116 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 B3GALT1Q9Y5Z6 326 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 CFAP47Q6ZTR5 3102 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 BTN3A1O00481 513 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 NELFEP18615 380 aaKnown RBP19.85■□□□□ 0.77
CCS-208ENST00000533244 POLR2CP19387 275 aaPredicted RBP19.85■□□□□ 0.77
CCS-208ENST00000533244 ITPKBP27987 946 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 SHMT2P34897 504 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 SEPHS1P49903 392 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 CLCN7P51798 805 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 CALCOCO2Q13137 446 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 GRB7Q14451 532 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 FASTKD3Q14CZ7 662 aaKnown RBP19.85■□□□□ 0.77
CCS-208ENST00000533244 HP1BP3Q5SSJ5 553 aaPredicted RBP19.85■□□□□ 0.77
CCS-208ENST00000533244 ARMC6Q6NXE6 501 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 GALNT7Q86SF2 657 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 KMT5CQ86Y97 462 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 ADGRF3Q8IZF5 1079 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 TRIM44Q96DX7 344 aaPredicted RBP19.85■□□□□ 0.77
CCS-208ENST00000533244 TEFMQ96QE5 360 aaKnown RBP19.85■□□□□ 0.77
CCS-208ENST00000533244 MENTQ9BUN1 341 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 ASPSCR1Q9BZE9 553 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 KLHL42Q9P2K6 505 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 MRFAP1Q9Y605 127 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 COMMD10Q9Y6G5 202 aa19.85■□□□□ 0.77
CCS-208ENST00000533244 SDK2Q58EX2 2172 aa19.84■□□□□ 0.77
CCS-208ENST00000533244 PTPRQQ9UMZ3 2332 aa19.84■□□□□ 0.77
CCS-208ENST00000533244 HAUS5O94927 633 aa19.84■□□□□ 0.77
CCS-208ENST00000533244 CHRM3P20309 590 aa19.84■□□□□ 0.77
CCS-208ENST00000533244 GABRB3P28472 473 aa19.84■□□□□ 0.77
CCS-208ENST00000533244 TLE3Q04726 772 aa19.84■□□□□ 0.77
CCS-208ENST00000533244 PDIA2Q13087 525 aaKnown RBP19.84■□□□□ 0.77
CCS-208ENST00000533244 PRKAA1Q13131 559 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms