RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 C8AP07357 584 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 GNPDA1P46926 289 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 RPIAP49247 311 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 SPANXN4Q5MJ08 99 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 TMTC4Q5T4D3 741 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 DET1Q7L5Y6 550 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 VRK3Q8IV63 474 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 RIMKLAQ8IXN7 391 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 TBC1D21Q8IYX1 336 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 LIX1Q8N485 282 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 CHST14Q8NCH0 376 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 SLC13A3Q8WWT9 602 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 USP7Q93009 1102 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 FBXL20Q96IG2 436 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 MCCC1Q96RQ3 725 aaPredicted RBP15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 MAFFQ9ULX9 164 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 AREL1O15033 823 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 SEC22BO75396 215 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 C1SP09871 688 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 FCGR1AP12314 374 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 ZNF23P17027 643 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 HSPA14Q0VDF9 509 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 CRY1Q16526 586 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 CPSF6Q16630 551 aaKnown RBP eCLIP15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 TTLL9Q3SXZ7 439 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 USP45Q70EL2 814 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 METTL3Q86U44 580 aaKnown RBP15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 MSRB3Q8IXL7 192 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 CHCHD4Q8N4Q1 142 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 CLHC1Q8NHS4 586 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 BPIFB1Q8TDL5 484 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 NSMCE2Q96MF7 247 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 SOX17Q9H6I2 414 aaPredicted RBP15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 BRD9Q9H8M2 597 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 NTN4Q9HB63 628 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 KCTD5Q9NXV2 234 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 SLC25A37Q9NYZ2 338 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 TRPS1Q9UHF7 1281 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 EIF3LQ9Y262 564 aaKnown RBP15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 CEPT1Q9Y6K0 416 aa15.01□□□□□ -0.01
CACNA1E-208ENST00000533229 SLC28A1O00337 649 aa15□□□□□ -0.01
CACNA1E-208ENST00000533229 MTX2O75431 263 aa15□□□□□ -0.01
CACNA1E-208ENST00000533229 ANXA5P08758 320 aa15□□□□□ -0.01
CACNA1E-208ENST00000533229 ACRP10323 421 aa15□□□□□ -0.01
CACNA1E-208ENST00000533229 CTSAP10619 480 aa15□□□□□ -0.01
CACNA1E-208ENST00000533229 MYF6P23409 242 aa15□□□□□ -0.01
CACNA1E-208ENST00000533229 PRR23BQ6ZRT6 265 aa15□□□□□ -0.01
CACNA1E-208ENST00000533229 TRIML2Q8N7C3 387 aa15□□□□□ -0.01
CACNA1E-208ENST00000533229 FAM86B1Q8N7N1 296 aa15□□□□□ -0.01
CACNA1E-208ENST00000533229 MAGEE2Q8TD90 523 aaPredicted RBP15□□□□□ -0.01
CACNA1E-208ENST00000533229 MPP4Q96JB8 637 aa15□□□□□ -0.01
CACNA1E-208ENST00000533229 YME1L1Q96TA2 773 aa15□□□□□ -0.01
CACNA1E-208ENST00000533229 ACPTQ9BZG2 426 aa15□□□□□ -0.01
CACNA1E-208ENST00000533229 CARS2Q9HA77 564 aaKnown RBP15□□□□□ -0.01
CACNA1E-208ENST00000533229 CLK4Q9HAZ1 481 aaKnown RBP15□□□□□ -0.01
CACNA1E-208ENST00000533229 LRTM1Q9HBL6 345 aa15□□□□□ -0.01
CACNA1E-208ENST00000533229 SLC6A13Q9NSD5 602 aa15□□□□□ -0.01
CACNA1E-208ENST00000533229 ARL15Q9NXU5 204 aa15□□□□□ -0.01
CACNA1E-208ENST00000533229 B4GALT6Q9UBX8 382 aa15□□□□□ -0.01
CACNA1E-208ENST00000533229 MAGEL2Q9UJ55 1249 aa15□□□□□ -0.01
CACNA1E-208ENST00000533229 DMTF1Q9Y222 760 aa15□□□□□ -0.01
CACNA1E-208ENST00000533229 IGLV3-16A0A075B6K0 115 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 KANSL1LA0AUZ9 987 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 UPK1AO00322 258 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 IFRD1O00458 451 aaPredicted RBP14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 CCL16O15467 120 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 OBSL1O75147 1896 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 SEC24DO94855 1032 aaPredicted RBP14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 KCNH1O95259 989 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 LDLRP01130 860 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 PGRP06401 933 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 LINC00271P0C7V0 271 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 GGT1P19440 569 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 PCSK6P29122 969 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 NEK2P51955 445 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 PTPN5P54829 565 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 GTDC1Q4AE62 458 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 USP39Q53GS9 565 aaKnown RBP14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 SERPINA13PQ6UXR4 307 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 RNF165Q6ZSG1 346 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 Q6ZVU0 165 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 OR8J3Q8NGG0 315 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 OR10A6Q8NH74 314 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 PYCR2Q96C36 320 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 ULK4Q96C45 1275 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 TCEAL4Q96EI5 215 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 VPS50Q96JG6 964 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 DPY30Q9C005 99 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 OCEL1Q9H607 264 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 VCX3AQ9NNX9 186 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 ZNF639Q9UID6 485 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 SCN8AQ9UQD0 1980 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 NEDD8-MDP1E9PL57 170 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 WDR47O94967 919 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 CLDN9O95484 217 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 SNAP29O95721 258 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 PDYNP01213 254 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 CBSLP0DN79 551 aa14.99□□□□□ -0.01
CACNA1E-208ENST00000533229 PCNAP12004 261 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms