RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 EPHA6Q9UF33 1036 aa14.09□□□□□ -0.15
CPSF1-206ENST00000531480 ANGPTL2Q9UKU9 493 aa14.09□□□□□ -0.15
CPSF1-206ENST00000531480 CACNA1BQ00975 2339 aa14.09□□□□□ -0.15
CPSF1-206ENST00000531480 RIPK2O43353 540 aa14.08□□□□□ -0.16
CPSF1-206ENST00000531480 PSIP1O75475 530 aaKnown RBP14.08□□□□□ -0.16
CPSF1-206ENST00000531480 ACSL3O95573 720 aa14.08□□□□□ -0.16
CPSF1-206ENST00000531480 CPNE6O95741 557 aa14.08□□□□□ -0.16
CPSF1-206ENST00000531480 TPBGLP0DKB5 382 aa14.08□□□□□ -0.16
CPSF1-206ENST00000531480 MPC1LP0DKB6 136 aa14.08□□□□□ -0.16
CPSF1-206ENST00000531480 SPINK2P20155 84 aa14.08□□□□□ -0.16
CPSF1-206ENST00000531480 ALDH4A1P30038 563 aa14.08□□□□□ -0.16
CPSF1-206ENST00000531480 CSF2RBP32927 897 aa14.08□□□□□ -0.16
CPSF1-206ENST00000531480 MAPK9P45984 424 aa14.08□□□□□ -0.16
CPSF1-206ENST00000531480 CSRP3P50461 194 aa14.08□□□□□ -0.16
CPSF1-206ENST00000531480 PMS2P54278 862 aa14.08□□□□□ -0.16
CPSF1-206ENST00000531480 SHC2P98077 582 aa14.08□□□□□ -0.16
CPSF1-206ENST00000531480 POU4F1Q01851 419 aa14.08□□□□□ -0.16
CPSF1-206ENST00000531480 GRB7Q14451 532 aa14.08□□□□□ -0.16
CPSF1-206ENST00000531480 ZKSCAN8Q15776 578 aaPredicted RBP14.08□□□□□ -0.16
CPSF1-206ENST00000531480 HES3Q5TGS1 186 aa14.08□□□□□ -0.16
CPSF1-206ENST00000531480 LRRC8EQ6NSJ5 796 aa14.08□□□□□ -0.16
CPSF1-206ENST00000531480 TMPRSS9Q7Z410 1059 aa14.08□□□□□ -0.16
CPSF1-206ENST00000531480 ZNF761Q86XN6 746 aaPredicted RBP14.08□□□□□ -0.16
CPSF1-206ENST00000531480 SLITRK4Q8IW52 837 aa14.08□□□□□ -0.16
CPSF1-206ENST00000531480 GSPT2Q8IYD1 628 aaKnown RBP14.08□□□□□ -0.16
CPSF1-206ENST00000531480 Q8N9G6 341 aaPredicted RBP14.08□□□□□ -0.16
CPSF1-206ENST00000531480 FBXO15Q8NCQ5 510 aaPredicted RBP14.08□□□□□ -0.16
CPSF1-206ENST00000531480 OR5AR1Q8NGP9 310 aa14.08□□□□□ -0.16
CPSF1-206ENST00000531480 FAM136AQ96C01 138 aa14.08□□□□□ -0.16
CPSF1-206ENST00000531480 PDLIM5Q96HC4 596 aaKnown RBP14.08□□□□□ -0.16
CPSF1-206ENST00000531480 GFM1Q96RP9 751 aaKnown RBP14.08□□□□□ -0.16
CPSF1-206ENST00000531480 TBC1D10AQ9BXI6 508 aa14.08□□□□□ -0.16
CPSF1-206ENST00000531480 ABCG4Q9H172 646 aa14.08□□□□□ -0.16
CPSF1-206ENST00000531480 POLG2Q9UHN1 485 aa14.08□□□□□ -0.16
CPSF1-206ENST00000531480 ASF1AQ9Y294 204 aa14.08□□□□□ -0.16
CPSF1-206ENST00000531480 MN1Q10571 1320 aaPredicted RBP14.08□□□□□ -0.16
CPSF1-206ENST00000531480 FAM95CA0A1B0GW59 222 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 HMX2A2RU54 273 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 GFYI3L273 518 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 DUX1O43812 170 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 UBXN7O94888 489 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 TOP3BO95985 862 aaKnown RBP14.07□□□□□ -0.16
CPSF1-206ENST00000531480 MT-CO3P00414 261 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 C9P02748 559 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 CCKBRP32239 447 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 SPRP35270 261 aaPredicted RBP14.07□□□□□ -0.16
CPSF1-206ENST00000531480 CAPZBP47756 277 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 BIRC2Q13490 618 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 SPIDRQ14159 915 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 EFTUD2Q15029 972 aaKnown RBP eCLIP14.07□□□□□ -0.164e-13■■■■■ 32.1
CPSF1-206ENST00000531480 ST3GAL2Q16842 350 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 KLHL38Q2WGJ6 581 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 PAQR3Q6TCH7 311 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 ZNF574Q6ZN55 896 aaPredicted RBP14.07□□□□□ -0.16
CPSF1-206ENST00000531480 RBM44Q6ZP01 1051 aaKnown RBP14.07□□□□□ -0.16
CPSF1-206ENST00000531480 HDXQ7Z353 690 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 PIM3Q86V86 326 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 DCUN1D3Q8IWE4 304 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 CTAGE3PQ8IX95 158 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 CHCHD4Q8N4Q1 142 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 PPM1NQ8N819 430 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 GPATCH11Q8N954 259 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 PHC3Q8NDX5 983 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 OR4D9Q8NGE8 314 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 OR10G6Q8NH81 332 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 SLC44A1Q8WWI5 657 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 ASB11Q8WXH4 323 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 FERD3LQ96RJ6 166 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 DHRS4Q9BTZ2 278 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 TRIT1Q9H3H1 467 aaKnown RBP14.07□□□□□ -0.16
CPSF1-206ENST00000531480 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.07□□□□□ -0.16
CPSF1-206ENST00000531480 FETUBQ9UGM5 382 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 TRMT6Q9UJA5 497 aaKnown RBP14.07□□□□□ -0.16
CPSF1-206ENST00000531480 CLCA2Q9UQC9 943 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 MTO1Q9Y2Z2 717 aaKnown RBP14.07□□□□□ -0.16
CPSF1-206ENST00000531480 CHD8Q9HCK8 2581 aa14.07□□□□□ -0.16
CPSF1-206ENST00000531480 AKAP13Q12802 2813 aa14.06□□□□□ -0.16
CPSF1-206ENST00000531480 A0A087WUV0 522 aaPredicted RBP14.06□□□□□ -0.16
CPSF1-206ENST00000531480 FAM155BO75949 473 aa14.06□□□□□ -0.16
CPSF1-206ENST00000531480 KRT37O76014 449 aa14.06□□□□□ -0.16
CPSF1-206ENST00000531480 C1orf105O95561 183 aa14.06□□□□□ -0.16
CPSF1-206ENST00000531480 RPN2P04844 631 aa14.06□□□□□ -0.16
CPSF1-206ENST00000531480 PROS1P07225 676 aa14.06□□□□□ -0.16
CPSF1-206ENST00000531480 ZNF37AP17032 561 aaPredicted RBP14.06□□□□□ -0.16
CPSF1-206ENST00000531480 CCNFP41002 786 aa14.06□□□□□ -0.16
CPSF1-206ENST00000531480 TAS2R39P59534 338 aa14.06□□□□□ -0.16
CPSF1-206ENST00000531480 CAMK2BQ13554 666 aa14.06□□□□□ -0.16
CPSF1-206ENST00000531480 ISXQ2M1V0 245 aa14.06□□□□□ -0.16
CPSF1-206ENST00000531480 TMEM71Q6P5X7 295 aa14.06□□□□□ -0.16
CPSF1-206ENST00000531480 TMEM207Q6UWW9 146 aa14.06□□□□□ -0.16
CPSF1-206ENST00000531480 CROCCP2Q86T23 111 aa14.06□□□□□ -0.16
CPSF1-206ENST00000531480 CEP97Q8IW35 865 aa14.06□□□□□ -0.16
CPSF1-206ENST00000531480 CPNE9Q8IYJ1 553 aa14.06□□□□□ -0.16
CPSF1-206ENST00000531480 GOLGA6L1Q8N7Z2 621 aa14.06□□□□□ -0.16
CPSF1-206ENST00000531480 OR52E1Q8NGJ3 308 aa14.06□□□□□ -0.16
CPSF1-206ENST00000531480 AENQ8WTP8 325 aaKnown RBP14.06□□□□□ -0.16
CPSF1-206ENST00000531480 ANKRD7Q92527 254 aa14.06□□□□□ -0.16
CPSF1-206ENST00000531480 RSC1A1Q92681 617 aa14.06□□□□□ -0.16
CPSF1-206ENST00000531480 ELMO2Q96JJ3 720 aa14.06□□□□□ -0.16
CPSF1-206ENST00000531480 NUDT22Q9BRQ3 303 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms