RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 CYYR1Q96J86 154 aa3.53□□□□□ -1.84
PTPRK-220ENST00000531466 MAELQ96JY0 434 aaKnown RBP3.53□□□□□ -1.84
PTPRK-220ENST00000531466 RTN4RQ9BZR6 473 aa3.53□□□□□ -1.84
PTPRK-220ENST00000531466 DENND2DQ9H6A0 471 aaPredicted RBP3.53□□□□□ -1.84
PTPRK-220ENST00000531466 ATP13A3Q9H7F0 1226 aa3.53□□□□□ -1.84
PTPRK-220ENST00000531466 CLIC5Q9NZA1 410 aa3.53□□□□□ -1.84
PTPRK-220ENST00000531466 SLC13A4Q9UKG4 626 aa3.53□□□□□ -1.84
PTPRK-220ENST00000531466 ZCCHC6Q5VYS8 1495 aaKnown RBP3.53□□□□□ -1.84
PTPRK-220ENST00000531466 A0A1W2PRQ8 180 aa3.52□□□□□ -1.85
PTPRK-220ENST00000531466 PSMA3P25788 255 aa3.52□□□□□ -1.85
PTPRK-220ENST00000531466 TLE2Q04725 743 aa3.52□□□□□ -1.85
PTPRK-220ENST00000531466 TRIM29Q14134 588 aa3.52□□□□□ -1.85
PTPRK-220ENST00000531466 FASTKD3Q14CZ7 662 aaKnown RBP3.52□□□□□ -1.85
PTPRK-220ENST00000531466 TAF12Q16514 161 aa3.52□□□□□ -1.85
PTPRK-220ENST00000531466 CCDC158Q5M9N0 1113 aa3.52□□□□□ -1.85
PTPRK-220ENST00000531466 JAKMIP3Q5VZ66 844 aa3.52□□□□□ -1.85
PTPRK-220ENST00000531466 SEPT14Q6ZU15 432 aa3.52□□□□□ -1.85
PTPRK-220ENST00000531466 OTUD6AQ7L8S5 288 aa3.52□□□□□ -1.85
PTPRK-220ENST00000531466 MNS1Q8NEH6 495 aa3.52□□□□□ -1.85
PTPRK-220ENST00000531466 OR8K5Q8NH50 307 aa3.52□□□□□ -1.85
PTPRK-220ENST00000531466 AZIN2Q96A70 460 aa3.52□□□□□ -1.85
PTPRK-220ENST00000531466 CCDC34Q96HJ3 373 aa3.52□□□□□ -1.85
PTPRK-220ENST00000531466 PPM1MQ96MI6 270 aa3.52□□□□□ -1.85
PTPRK-220ENST00000531466 ZNF830Q96NB3 372 aaPredicted RBP3.52□□□□□ -1.85
PTPRK-220ENST00000531466 ACKR4Q9NPB9 350 aa3.52□□□□□ -1.85
PTPRK-220ENST00000531466 SPHK2Q9NRA0 654 aa3.52□□□□□ -1.85
PTPRK-220ENST00000531466 RRN3Q9NYV6 651 aa3.52□□□□□ -1.85
PTPRK-220ENST00000531466 PRDM4Q9UKN5 801 aa3.52□□□□□ -1.85
PTPRK-220ENST00000531466 TMCC3Q9ULS5 477 aa3.52□□□□□ -1.85
PTPRK-220ENST00000531466 TMEM98Q9Y2Y6 226 aa3.52□□□□□ -1.85
PTPRK-220ENST00000531466 IKBKGQ9Y6K9 419 aa3.52□□□□□ -1.85
PTPRK-220ENST00000531466 A0A1W2PRG0 241 aa3.51□□□□□ -1.85
PTPRK-220ENST00000531466 TRIM64CA6NLI5 447 aa3.51□□□□□ -1.85
PTPRK-220ENST00000531466 IPO8O15397 1037 aaKnown RBP3.51□□□□□ -1.85
PTPRK-220ENST00000531466 FIBPO43427 364 aa3.51□□□□□ -1.85
PTPRK-220ENST00000531466 EFNA1P20827 205 aaPredicted RBP3.51□□□□□ -1.85
PTPRK-220ENST00000531466 CNTFP26441 200 aa3.51□□□□□ -1.85
PTPRK-220ENST00000531466 EIF5P55010 431 aaKnown RBP3.51□□□□□ -1.85
PTPRK-220ENST00000531466 VAMP2P63027 116 aa3.51□□□□□ -1.85
PTPRK-220ENST00000531466 IFT88Q13099 833 aa3.51□□□□□ -1.85
PTPRK-220ENST00000531466 CALCOCO2Q13137 446 aa3.51□□□□□ -1.85
PTPRK-220ENST00000531466 HYIQ5T013 277 aa3.51□□□□□ -1.85
PTPRK-220ENST00000531466 C1QTNF12Q5T7M4 302 aa3.51□□□□□ -1.85
PTPRK-220ENST00000531466 Q6ZVH6 145 aa3.51□□□□□ -1.85
PTPRK-220ENST00000531466 CEP97Q8IW35 865 aa3.51□□□□□ -1.85
PTPRK-220ENST00000531466 ARL6IP6Q8N6S5 226 aa3.51□□□□□ -1.85
PTPRK-220ENST00000531466 SYAP1Q96A49 352 aaPredicted RBP3.51□□□□□ -1.85
PTPRK-220ENST00000531466 MPP4Q96JB8 637 aa3.51□□□□□ -1.85
PTPRK-220ENST00000531466 PRICKLE1Q96MT3 831 aaPredicted RBP3.51□□□□□ -1.85
PTPRK-220ENST00000531466 UNC45AQ9H3U1 944 aa3.51□□□□□ -1.85
PTPRK-220ENST00000531466 FBXL17Q9UF56 701 aa3.51□□□□□ -1.85
PTPRK-220ENST00000531466 TSPYL4Q9UJ04 414 aa3.51□□□□□ -1.85
PTPRK-220ENST00000531466 COL4A4P53420 1690 aaPredicted RBP3.5□□□□□ -1.85
PTPRK-220ENST00000531466 GTPBP10A4D1E9 387 aaKnown RBP3.5□□□□□ -1.85
PTPRK-220ENST00000531466 HOXC11O43248 304 aaPredicted RBP3.5□□□□□ -1.85
PTPRK-220ENST00000531466 MAGEC1O60732 1142 aa3.5□□□□□ -1.85
PTPRK-220ENST00000531466 PAGE4O60829 102 aa3.5□□□□□ -1.85
PTPRK-220ENST00000531466 SLC25A12O75746 678 aa3.5□□□□□ -1.85
PTPRK-220ENST00000531466 PIGNO95427 931 aa3.5□□□□□ -1.85
PTPRK-220ENST00000531466 F9P00740 461 aa3.5□□□□□ -1.85
PTPRK-220ENST00000531466 IGHDP01880 384 aa3.5□□□□□ -1.85
PTPRK-220ENST00000531466 CCDC175P0C221 793 aa3.5□□□□□ -1.85
PTPRK-220ENST00000531466 SIM2Q14190 667 aaPredicted RBP3.5□□□□□ -1.85
PTPRK-220ENST00000531466 TAF13Q15543 124 aa3.5□□□□□ -1.85
PTPRK-220ENST00000531466 BAK1Q16611 211 aa3.5□□□□□ -1.85
PTPRK-220ENST00000531466 MEP1AQ16819 746 aa3.5□□□□□ -1.85
PTPRK-220ENST00000531466 C15orf32Q32M92 178 aa3.5□□□□□ -1.85
PTPRK-220ENST00000531466 TTC31Q49AM3 519 aaPredicted RBP3.5□□□□□ -1.85
PTPRK-220ENST00000531466 HIGD2BQ4VC39 106 aa3.5□□□□□ -1.85
PTPRK-220ENST00000531466 TICAM1Q8IUC6 712 aa3.5□□□□□ -1.85
PTPRK-220ENST00000531466 CNTROBQ8N137 903 aa3.5□□□□□ -1.85
PTPRK-220ENST00000531466 NFKBIDQ8NI38 313 aa3.5□□□□□ -1.85
PTPRK-220ENST00000531466 DAZLQ92904 295 aaKnown RBP3.5□□□□□ -1.85
PTPRK-220ENST00000531466 SKA1Q96BD8 255 aa3.5□□□□□ -1.85
PTPRK-220ENST00000531466 RNF125Q96EQ8 232 aa3.5□□□□□ -1.85
PTPRK-220ENST00000531466 ZNF582Q96NG8 517 aaPredicted RBP3.5□□□□□ -1.85
PTPRK-220ENST00000531466 NR1H4Q96RI1 486 aaPredicted RBP3.5□□□□□ -1.85
PTPRK-220ENST00000531466 STRA6Q9BX79 667 aa3.5□□□□□ -1.85
PTPRK-220ENST00000531466 SLA2Q9H6Q3 261 aa3.5□□□□□ -1.85
PTPRK-220ENST00000531466 SCPEP1Q9HB40 452 aa3.5□□□□□ -1.85
PTPRK-220ENST00000531466 WASH6PQ9NQA3 447 aa3.5□□□□□ -1.85
PTPRK-220ENST00000531466 UTP6Q9NYH9 597 aaKnown RBP3.5□□□□□ -1.85
PTPRK-220ENST00000531466 SOS1Q07889 1333 aaPredicted RBP3.49□□□□□ -1.85
PTPRK-220ENST00000531466 LOC101059948A0A1B0GTJ6 334 aa3.49□□□□□ -1.85
PTPRK-220ENST00000531466 CCDC196A0A1B0GTZ2 297 aa3.49□□□□□ -1.85
PTPRK-220ENST00000531466 A0A1W2PRB8 838 aa3.49□□□□□ -1.85
PTPRK-220ENST00000531466 RRN3P2A6NIE6 340 aa3.49□□□□□ -1.85
PTPRK-220ENST00000531466 CTAGE5O15320 804 aa3.49□□□□□ -1.85
PTPRK-220ENST00000531466 KRTAP5-8O75690 187 aa3.49□□□□□ -1.85
PTPRK-220ENST00000531466 AGR2O95994 175 aa3.49□□□□□ -1.85
PTPRK-220ENST00000531466 PYGLP06737 847 aa3.49□□□□□ -1.85
PTPRK-220ENST00000531466 TRPC1P48995 793 aa3.49□□□□□ -1.85
PTPRK-220ENST00000531466 RARSP54136 660 aaKnown RBP3.49□□□□□ -1.85
PTPRK-220ENST00000531466 PAX9P55771 341 aa3.49□□□□□ -1.85
PTPRK-220ENST00000531466 GEMIN4P57678 1058 aaKnown RBP3.49□□□□□ -1.85
PTPRK-220ENST00000531466 DDX10Q13206 875 aaKnown RBP3.49□□□□□ -1.85
PTPRK-220ENST00000531466 SMC1AQ14683 1233 aaKnown RBP3.49□□□□□ -1.85
PTPRK-220ENST00000531466 DPCR1Q3MIW9 517 aa3.49□□□□□ -1.85
PTPRK-220ENST00000531466 TPRG1Q6ZUI0 275 aa3.49□□□□□ -1.85
PTPRK-220ENST00000531466 GALNT13Q8IUC8 556 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms