RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 SBSNQ6UWP8 590 aa18.58■□□□□ 0.57
SMPD1-205ENST00000531303 ADAMTSL2Q86TH1 951 aa18.58■□□□□ 0.57
SMPD1-205ENST00000531303 GKN2Q86XP6 184 aa18.58■□□□□ 0.57
SMPD1-205ENST00000531303 SFTPA2Q8IWL1 248 aa18.58■□□□□ 0.57
SMPD1-205ENST00000531303 FAM76AQ8TAV0 307 aa18.58■□□□□ 0.57
SMPD1-205ENST00000531303 FERD3LQ96RJ6 166 aa18.58■□□□□ 0.57
SMPD1-205ENST00000531303 GAREM1Q9H706 876 aa18.58■□□□□ 0.57
SMPD1-205ENST00000531303 ARHGEF33A8MVX0 844 aa18.58■□□□□ 0.56
SMPD1-205ENST00000531303 B4DGG1 531 aa18.58■□□□□ 0.56
SMPD1-205ENST00000531303 KHNYNO15037 678 aaKnown RBP18.58■□□□□ 0.56
SMPD1-205ENST00000531303 YY2O15391 372 aa18.58■□□□□ 0.56
SMPD1-205ENST00000531303 KERAO60938 352 aa18.58■□□□□ 0.56
SMPD1-205ENST00000531303 PSIP1O75475 530 aaKnown RBP18.58■□□□□ 0.56
SMPD1-205ENST00000531303 CATP04040 527 aaKnown RBP18.58■□□□□ 0.56
SMPD1-205ENST00000531303 SBK3P0C264 359 aa18.58■□□□□ 0.56
SMPD1-205ENST00000531303 PRKG2Q13237 762 aa18.58■□□□□ 0.56
SMPD1-205ENST00000531303 KRT33BQ14525 404 aa18.58■□□□□ 0.56
SMPD1-205ENST00000531303 SHBQ15464 509 aa18.58■□□□□ 0.56
SMPD1-205ENST00000531303 RPE65Q16518 533 aa18.58■□□□□ 0.56
SMPD1-205ENST00000531303 TAX1BP1Q86VP1 789 aa18.58■□□□□ 0.56
SMPD1-205ENST00000531303 TMEM151AQ8N4L1 468 aa18.58■□□□□ 0.56
SMPD1-205ENST00000531303 OR5AR1Q8NGP9 310 aa18.58■□□□□ 0.56
SMPD1-205ENST00000531303 DENND1AQ8TEH3 1009 aa18.58■□□□□ 0.56
SMPD1-205ENST00000531303 PATE1Q8WXA2 126 aa18.58■□□□□ 0.56
SMPD1-205ENST00000531303 ATOH8Q96SQ7 321 aa18.58■□□□□ 0.56
SMPD1-205ENST00000531303 NUSAP1Q9BXS6 441 aaKnown RBP18.58■□□□□ 0.56
SMPD1-205ENST00000531303 PARVBQ9HBI1 364 aa18.58■□□□□ 0.56
SMPD1-205ENST00000531303 FAM53CQ9NYF3 392 aa18.58■□□□□ 0.56
SMPD1-205ENST00000531303 CD274Q9NZQ7 290 aa18.58■□□□□ 0.56
SMPD1-205ENST00000531303 PDE10AQ9Y233 779 aa18.58■□□□□ 0.56
SMPD1-205ENST00000531303 TDRKHQ9Y2W6 561 aaKnown RBP18.58■□□□□ 0.56
SMPD1-205ENST00000531303 PCDHGA5Q9Y5G8 931 aa18.58■□□□□ 0.56
SMPD1-205ENST00000531303 VPS13AQ96RL7 3174 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 PRAMEF33A0A0G2JMD5 474 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 PABPN1LA6NDY0 278 aaKnown RBP18.57■□□□□ 0.56
SMPD1-205ENST00000531303 NEMP2A6NFY4 417 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 GFYI3L273 518 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 ARHGAP33O14559 1287 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 POLR3GO15318 223 aaPredicted RBP18.57■□□□□ 0.56
SMPD1-205ENST00000531303 FFAR2O15552 330 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 C1orf105O95561 183 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 ANXA6P08133 673 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 SYPP08247 313 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 MYL2P10916 166 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 F3P13726 295 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 CPA3P15088 417 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 CHN1P15882 459 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 CYP2A7P20853 494 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 WDR4P57081 412 aaKnown RBP18.57■□□□□ 0.56
SMPD1-205ENST00000531303 ZNF423Q2M1K9 1284 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 CCSMST1Q4G0I0 132 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.57■□□□□ 0.56
SMPD1-205ENST00000531303 ABRAXAS1Q6UWZ7 409 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 MBOAT1Q6ZNC8 495 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 GATAD2AQ86YP4 633 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 SUMF1Q8NBK3 374 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 RHEBL1Q8TAI7 183 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 MCOLN3Q8TDD5 553 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 ZDHHC1Q8WTX9 485 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 MECRQ9BV79 373 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 SLC12A9Q9BXP2 914 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 TRIM54Q9BYV2 358 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 SIRPGQ9P1W8 387 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 OARD1Q9Y530 152 aa18.57■□□□□ 0.56
SMPD1-205ENST00000531303 PCDH15Q96QU1 1955 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 A6NCN8 305 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 SLC16A5O15375 505 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 HIST1H2AGP0C0S8 130 aaPredicted RBP18.56■□□□□ 0.56
SMPD1-205ENST00000531303 MTHFD1P11586 935 aaKnown RBP18.56■□□□□ 0.56
SMPD1-205ENST00000531303 GFAPP14136 432 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 TAC1P20366 129 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 HIST1H2ADP20671 130 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 KCNA4P22459 653 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 ETV4P43268 484 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 RXRGP48443 463 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 RPIAP49247 311 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 SLC18A1P54219 525 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 GYS2P54840 703 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 SP140Q13342 867 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 TGFBIQ15582 683 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 PPP1R3AQ16821 1122 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 IL27RAQ6UWB1 636 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 UNC5DQ6UXZ4 953 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 WASH2PQ6VEQ5 465 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 ARFGAP2Q8N6H7 521 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 CXorf40BQ96DE9 158 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 HIST1H2AHQ96KK5 128 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 HIST1H2AJQ99878 128 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 EGFL8Q99944 293 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 H2AFJQ9BTM1 129 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 HGH1Q9BTY7 390 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 WASH6PQ9NQA3 447 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 ARL15Q9NXU5 204 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 PCOLCE2Q9UKZ9 415 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 PLAGL1Q9UM63 463 aa18.56■□□□□ 0.56
SMPD1-205ENST00000531303 GOLGA4Q13439 2230 aaKnown RBP18.56■□□□□ 0.56
SMPD1-205ENST00000531303 MUC6Q6W4X9 2439 aa18.55■□□□□ 0.56
SMPD1-205ENST00000531303 A0A1B0GTQ1 180 aa18.55■□□□□ 0.56
SMPD1-205ENST00000531303 SYCE1LA8MT33 242 aa18.55■□□□□ 0.56
SMPD1-205ENST00000531303 TARM1B6A8C7 271 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms