RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 C19orf47Q8N9M1 422 aaKnown RBP11.18□□□□□ -0.62
CMTM1-211ENST00000528484 OR52E1Q8NGJ3 308 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 PPP4R1Q8TF05 950 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 P3H4Q92791 437 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 NACC2Q96BF6 587 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 RNF25Q96BH1 459 aaPredicted RBP11.18□□□□□ -0.62
CMTM1-211ENST00000528484 MRGPRX2Q96LB1 330 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 AGAP4Q96P64 663 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 FCRL5Q96RD9 977 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 RANBP9Q96S59 729 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 COPS8Q99627 209 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 KLHL25Q9H0H3 589 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 IGSF5Q9NSI5 407 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 ZNHIT6Q9NWK9 470 aaKnown RBP11.18□□□□□ -0.62
CMTM1-211ENST00000528484 ACTR10Q9NZ32 417 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 RSPH14Q9UHP6 348 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 TRHDEQ9UKU6 1024 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 OSGIN2Q9Y236 505 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.18□□□□□ -0.62
CMTM1-211ENST00000528484 ANKRD17O75179 2603 aaKnown RBP11.17□□□□□ -0.62
CMTM1-211ENST00000528484 AKAP9Q99996 3911 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 MDC1Q14676 2089 aaKnown RBP11.17□□□□□ -0.62
CMTM1-211ENST00000528484 C5orf60A6NFR6 353 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 PRSS44E7EML9 344 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 AGPSO00116 658 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 ANXA9O76027 345 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 CRTAMO95727 393 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 TPM3P06753 285 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 TMEM253P0C7T8 217 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 CBSLP0DN79 551 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 PIM1P11309 404 aaPredicted RBP11.17□□□□□ -0.62
CMTM1-211ENST00000528484 ATP1B2P14415 290 aaPredicted RBP11.17□□□□□ -0.62
CMTM1-211ENST00000528484 CD68P34810 354 aaPredicted RBP11.17□□□□□ -0.62
CMTM1-211ENST00000528484 CBSP35520 551 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 GEMP55040 296 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 SOX8P57073 446 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 UBASH3AP57075 661 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 CDC16Q13042 620 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 RPA4Q13156 261 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 TAF1AQ15573 450 aaPredicted RBP11.17□□□□□ -0.62
CMTM1-211ENST00000528484 ZRSR2Q15696 482 aaKnown RBP11.17□□□□□ -0.62
CMTM1-211ENST00000528484 SLC18A3Q16572 532 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 FAM182AQ5T1J6 154 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 B3GNTL1Q67FW5 361 aaPredicted RBP11.17□□□□□ -0.62
CMTM1-211ENST00000528484 FCRL6Q6DN72 434 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 ITPRIPL1Q6GPH6 555 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 FAM180AQ6UWF9 173 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 CUZD1Q86UP6 607 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 RHOT2Q8IXI1 618 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 OR4K2Q8NGD2 314 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 DNAJB14Q8TBM8 379 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 DLG3Q92796 817 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 CNDP1Q96KN2 507 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 HGH1Q9BTY7 390 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 COG4Q9H9E3 785 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 ARL5AQ9Y689 179 aa11.17□□□□□ -0.62
CMTM1-211ENST00000528484 OTOGQ6ZRI0 2925 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 SVILO95425 2214 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 APCP25054 2843 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 C3orf70A6NLC5 250 aaPredicted RBP11.16□□□□□ -0.62
CMTM1-211ENST00000528484 HACD1B0YJ81 288 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 BTN3A3O00478 584 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 GAPDHSO14556 408 aaPredicted RBP11.16□□□□□ -0.62
CMTM1-211ENST00000528484 SPOPO43791 374 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 AKR1B10O60218 316 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 CST8O60676 142 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 GSTM1P09488 218 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 PVRP15151 417 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 ITGAXP20702 1163 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 HNRNPH3P31942 346 aaKnown RBP11.16□□□□□ -0.62
CMTM1-211ENST00000528484 SHMT2P34897 504 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 CA5AP35218 305 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 SLC1A1P43005 524 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 TSFMP43897 325 aaKnown RBP11.16□□□□□ -0.62
CMTM1-211ENST00000528484 FANCCQ00597 558 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 GSTM4Q03013 218 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 WASHC5Q12768 1159 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 PRKG2Q13237 762 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 PRPSAP1Q14558 356 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 ZNF169Q14929 603 aaPredicted RBP11.16□□□□□ -0.62
CMTM1-211ENST00000528484 SLC9A5Q14940 896 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 NKAIN1Q4KMZ8 207 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 ZNF385CQ66K41 422 aaPredicted RBP11.16□□□□□ -0.62
CMTM1-211ENST00000528484 KAZNQ674X7 775 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 SPOCD1Q6ZMY3 1216 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 ZC3H18Q86VM9 953 aaKnown RBP11.16□□□□□ -0.62
CMTM1-211ENST00000528484 KCNMB4Q86W47 210 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 MCEMP1Q8IX19 187 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 ZNF567Q8N184 647 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 SLC35G2Q8TBE7 412 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 TFGQ92734 400 aaPredicted RBP11.16□□□□□ -0.62
CMTM1-211ENST00000528484 BARD1Q99728 777 aaKnown RBP11.16□□□□□ -0.62
CMTM1-211ENST00000528484 FICDQ9BVA6 458 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 PACSIN1Q9BY11 444 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 POLG2Q9UHN1 485 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 FKBPLQ9UIM3 349 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 CDC23Q9UJX2 597 aa11.16□□□□□ -0.62
CMTM1-211ENST00000528484 NOVA2Q9UNW9 492 aaKnown RBP11.16□□□□□ -0.62
CMTM1-211ENST00000528484 AAR2Q9Y312 384 aaKnown RBP11.16□□□□□ -0.62
CMTM1-211ENST00000528484 FBN2P35556 2912 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms