RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 PANX3Q96QZ0 392 aa7.57□□□□□ -1.2
SOX6-211ENST00000528429 C19orf43Q9BQ61 176 aa7.57□□□□□ -1.2
SOX6-211ENST00000528429 SERHL2Q9H4I8 314 aa7.57□□□□□ -1.2
SOX6-211ENST00000528429 MID1IP1Q9NPA3 183 aa7.57□□□□□ -1.2
SOX6-211ENST00000528429 THAP10Q9P2Z0 257 aaPredicted RBP7.57□□□□□ -1.2
SOX6-211ENST00000528429 EIF2B4Q9UI10 523 aaKnown RBP7.57□□□□□ -1.2
SOX6-211ENST00000528429 CDYLQ9Y232 598 aa7.57□□□□□ -1.2
SOX6-211ENST00000528429 ATP6AP2A0A1C7CYW4 349 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 CDK2AP1O14519 115 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 SPINT1O43278 529 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 SYNCRIPO60506 623 aaKnown RBP7.56□□□□□ -1.2
SOX6-211ENST00000528429 CRCPO75575 148 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 ATP6AP2O75787 350 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 C6P13671 934 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 ATP1B2P14415 290 aaPredicted RBP7.56□□□□□ -1.2
SOX6-211ENST00000528429 PBLDP30039 288 aaPredicted RBP7.56□□□□□ -1.2
SOX6-211ENST00000528429 SERPINB5P36952 375 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 CNTN1Q12860 1018 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 C18orf21Q32NC0 220 aaPredicted RBP7.56□□□□□ -1.2
SOX6-211ENST00000528429 LSM12Q3MHD2 195 aaKnown RBP7.56□□□□□ -1.2
SOX6-211ENST00000528429 HENMT1Q5T8I9 393 aaKnown RBP7.56□□□□□ -1.2
SOX6-211ENST00000528429 TMEM198Q66K66 360 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 TXNDC11Q6PKC3 985 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 MTSS1LQ765P7 747 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 ERN2Q76MJ5 926 aaKnown RBP7.56□□□□□ -1.2
SOX6-211ENST00000528429 ADAMTSL2Q86TH1 951 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 PELI3Q8N2H9 469 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 AFAP1L2Q8N4X5 818 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 SMRP1Q8NCR6 262 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 TMIEQ8NEW7 156 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 GANCQ8TET4 914 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 MSLNLQ96KJ4 702 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 P2RY13Q9BPV8 354 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 ZSCAN5AQ9BUG6 496 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 TTYH1Q9H313 450 aaPredicted RBP7.56□□□□□ -1.2
SOX6-211ENST00000528429 STN1Q9H668 368 aaKnown RBP7.56□□□□□ -1.2
SOX6-211ENST00000528429 SAR1AQ9NR31 198 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 ATXN10Q9UBB4 475 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 ADAMTS6Q9UKP5 1117 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 TRAF6Q9Y4K3 522 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 ASB1Q9Y576 335 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 K7ESM1 405 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 ARNTLO00327 626 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 TOR1BO14657 336 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 MID1O15344 667 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 CDK14O94921 469 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 ANP32DO95626 131 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 GSTT2P0CG29 244 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 GSTT2BP0CG30 244 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 CCR7P32248 378 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 EIF2DP41214 584 aaKnown RBP7.56□□□□□ -1.2
SOX6-211ENST00000528429 P2RY2P41231 377 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 RASSF2P50749 326 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 DCDC1P59894 354 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 SH3BP2P78314 561 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 MXRA7P84157 204 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 CREB5Q02930 508 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 ELP6Q0PNE2 266 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 HTR4Q13639 388 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 CCDC85BQ15834 202 aaPredicted RBP7.56□□□□□ -1.2
SOX6-211ENST00000528429 RBBP7Q16576 425 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 PHKG1Q16816 387 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 ANKDD1AQ495B1 522 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 ANKS6Q68DC2 871 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 RAET1GQ6H3X3 334 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 SHQ1Q6PI26 577 aaKnown RBP7.56□□□□□ -1.2
SOX6-211ENST00000528429 TECPR1Q7Z6L1 1165 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 TRAM1L1Q8N609 369 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 SLC22A8Q8TCC7 542 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 CATSPER2Q96P56 530 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 KCNA7Q96RP8 456 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 TRMOQ9BU70 441 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.56□□□□□ -1.2
SOX6-211ENST00000528429 VTI1BQ9UEU0 232 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 PIKFYVEQ9Y2I7 2098 aa7.56□□□□□ -1.2
SOX6-211ENST00000528429 IGLV3-16A0A075B6K0 115 aa7.55□□□□□ -1.2
SOX6-211ENST00000528429 LOC100653049A0A140TA62 436 aa7.55□□□□□ -1.2
SOX6-211ENST00000528429 A0A1B0GTL3 188 aa7.55□□□□□ -1.2
SOX6-211ENST00000528429 SLCO1B7G3V0H7 640 aa7.55□□□□□ -1.2
SOX6-211ENST00000528429 GIPC1O14908 333 aa7.55□□□□□ -1.2
SOX6-211ENST00000528429 AREL1O15033 823 aa7.55□□□□□ -1.2
SOX6-211ENST00000528429 RAD51BO15315 384 aa7.55□□□□□ -1.2
SOX6-211ENST00000528429 MAGEC1O60732 1142 aa7.55□□□□□ -1.2
SOX6-211ENST00000528429 ATP5HO75947 161 aa7.55□□□□□ -1.2
SOX6-211ENST00000528429 KRT34O76011 436 aa7.55□□□□□ -1.2
SOX6-211ENST00000528429 PCDH8O95206 1070 aa7.55□□□□□ -1.2
SOX6-211ENST00000528429 KRT16P08779 473 aa7.55□□□□□ -1.2
SOX6-211ENST00000528429 NQO1P15559 274 aaKnown RBP7.55□□□□□ -1.2
SOX6-211ENST00000528429 CLCQ05315 142 aa7.55□□□□□ -1.2
SOX6-211ENST00000528429 BTKQ06187 659 aa7.55□□□□□ -1.2
SOX6-211ENST00000528429 SBSNQ6UWP8 590 aa7.55□□□□□ -1.2
SOX6-211ENST00000528429 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.55□□□□□ -1.2
SOX6-211ENST00000528429 MBOAT1Q6ZNC8 495 aa7.55□□□□□ -1.2
SOX6-211ENST00000528429 DDIASQ8IXT1 998 aa7.55□□□□□ -1.2
SOX6-211ENST00000528429 BTN2A2Q8WVV5 523 aa7.55□□□□□ -1.2
SOX6-211ENST00000528429 ELMO1Q92556 727 aa7.55□□□□□ -1.2
SOX6-211ENST00000528429 GLYATL1Q969I3 302 aa7.55□□□□□ -1.2
SOX6-211ENST00000528429 ATP6V1E2Q96A05 226 aa7.55□□□□□ -1.2
SOX6-211ENST00000528429 SLC7A6OSQ96CW6 309 aaPredicted RBP7.55□□□□□ -1.2
SOX6-211ENST00000528429 NUS1Q96E22 293 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms