RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 C1orf87Q8N0U7 546 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 HJURPQ8NCD3 748 aaPredicted RBP5.64□□□□□ -1.51
PCF11-202ENST00000528336 BRSK1Q8TDC3 778 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 GRK7Q8WTQ7 553 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 TAAR8Q969N4 342 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 ZNF653Q96CK0 615 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 EGLN2Q96KS0 407 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 C16orf45Q96MC5 204 aaPredicted RBP5.64□□□□□ -1.51
PCF11-202ENST00000528336 DACH2Q96NX9 599 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 QRFPRQ96P65 431 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 NT5C3AQ9H0P0 336 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 TNMDQ9H2S6 317 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 COPS7BQ9H9Q2 264 aaPredicted RBP5.64□□□□□ -1.51
PCF11-202ENST00000528336 TMEM30AQ9NV96 361 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 SETD4Q9NVD3 440 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 MTMR10Q9NXD2 777 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 RALYQ9UKM9 306 aaKnown RBP5.64□□□□□ -1.51
PCF11-202ENST00000528336 SESN1Q9Y6P5 492 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 FAM169AQ9Y6X4 670 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 PLEKHG1Q9ULL1 1385 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 NEXMIFQ5QGS0 1516 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 STRCQ7RTU9 1775 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 KIF1BO60333 1816 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 IFITM10A6NMD0 228 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 EIF4E1BA6NMX2 242 aaKnown RBP5.63□□□□□ -1.51
PCF11-202ENST00000528336 SCAMP1O15126 338 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 PRPSAP2O60256 369 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 CDH1P12830 882 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 HLA-DOBP13765 273 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 TLX1P31314 330 aaPredicted RBP5.63□□□□□ -1.51
PCF11-202ENST00000528336 HSPA4P34932 840 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 IL15P40933 162 aaPredicted RBP5.63□□□□□ -1.51
PCF11-202ENST00000528336 FASLGP48023 281 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 TKTL1P51854 596 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 FUT6P51993 359 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 CDH8P55286 799 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 CLDN20P56880 219 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 ACTN3Q08043 901 aaPredicted RBP5.63□□□□□ -1.51
PCF11-202ENST00000528336 ACSM2AQ08AH3 577 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 KLHL30Q0D2K2 578 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 MORF4L2Q15014 288 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 ACSM2BQ68CK6 577 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 TRNP1Q6NT89 227 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 CHST9Q7L1S5 443 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 EXOC3L1Q86VI1 746 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 SCML4Q8N228 414 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 TDRD5Q8NAT2 981 aaKnown RBP5.63□□□□□ -1.51
PCF11-202ENST00000528336 KRT35Q92764 455 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 CD101Q93033 1021 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 PIGTQ969N2 578 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 FAM162AQ96A26 154 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 GAD1Q99259 594 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 PKP4Q99569 1192 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 CITED2Q99967 270 aaPredicted RBP5.63□□□□□ -1.51
PCF11-202ENST00000528336 TEX13BQ9BXU2 312 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 DONSONQ9NYP3 566 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 CACNG4Q9UBN1 327 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 FBXW11Q9UKB1 542 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 OR2W1Q9Y3N9 320 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 PTPRCP08575 1304 aa5.63□□□□□ -1.51
PCF11-202ENST00000528336 EME2A4GXA9 379 aaPredicted RBP5.62□□□□□ -1.51
PCF11-202ENST00000528336 LILRA5A6NI73 299 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 ANKRD28O15084 1053 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 KCNN4O15554 427 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 HS6ST1O60243 411 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 KINO60870 393 aaKnown RBP5.62□□□□□ -1.51
PCF11-202ENST00000528336 GPC4O75487 556 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 PALMO75781 387 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 STAM2O75886 525 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 SNX4O95219 450 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 OR2C1O95371 312 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 ANXA7P20073 488 aaKnown RBP5.62□□□□□ -1.51
PCF11-202ENST00000528336 IL10P22301 178 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 GP5P40197 560 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 AMPHP49418 695 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 CAMPP49913 170 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 SLC12A3P55017 1021 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 YBEYP58557 167 aaPredicted RBP5.62□□□□□ -1.51
PCF11-202ENST00000528336 COG7P83436 770 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 POU3F1Q03052 451 aaPredicted RBP5.62□□□□□ -1.51
PCF11-202ENST00000528336 YWHAHQ04917 246 aaPredicted RBP5.62□□□□□ -1.51
PCF11-202ENST00000528336 IKQ13123 557 aaPredicted RBP5.62□□□□□ -1.51
PCF11-202ENST00000528336 ZKSCAN8Q15776 578 aaPredicted RBP5.62□□□□□ -1.51
PCF11-202ENST00000528336 ZNF718Q3SXZ3 478 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 SOWAHCQ53LP3 525 aaPredicted RBP5.62□□□□□ -1.51
PCF11-202ENST00000528336 BMP2KLQ5H9B9 411 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 FAM76BQ5HYJ3 339 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 NSUN5P2Q63ZY6 315 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 TMEM198Q66K66 360 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 KIAA0930Q6ICG6 404 aaPredicted RBP5.62□□□□□ -1.51
PCF11-202ENST00000528336 WBP2NLQ6ICG8 309 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 ADGRA1Q86SQ6 560 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 TMPRSS12Q86WS5 348 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 TICAM1Q8IUC6 712 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 MAP7D3Q8IWC1 876 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.62□□□□□ -1.51
PCF11-202ENST00000528336 MAB21L3Q8N8X9 362 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 ZBTB44Q8NCP5 570 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 PGAP3Q96FM1 320 aaPredicted RBP5.62□□□□□ -1.51
PCF11-202ENST00000528336 OR2A14Q96R47 310 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms