RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 TBC1D14Q9P2M4 693 aa14.4□□□□□ -0.1
CAPN1-214ENST00000528165 EIF3LQ9Y262 564 aaKnown RBP14.4□□□□□ -0.1
CAPN1-214ENST00000528165 E2F3O00716 465 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 KLK8O60259 260 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 PRSS56P0CW18 603 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 DBTP11182 482 aaKnown RBP14.39□□□□□ -0.11
CAPN1-214ENST00000528165 POLR2EP19388 210 aaKnown RBP14.39□□□□□ -0.11
CAPN1-214ENST00000528165 GBX1Q14549 363 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 LAPTM4AQ15012 233 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 UBE2UQ5VVX9 321 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 AGAP6Q5VW22 663 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 AHSA2Q719I0 299 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 C14orf80Q86SX3 495 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 TMEM86AQ8N2M4 240 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 NKAPQ8N5F7 415 aaKnown RBP14.39□□□□□ -0.11
CAPN1-214ENST00000528165 PARP16Q8N5Y8 322 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 PYCR2Q96C36 320 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 HMCESQ96FZ2 354 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 AGAP4Q96P64 663 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 RNF38Q9H0F5 515 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 ERVW-1Q9UQF0 538 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 ASB1Q9Y576 335 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 CSADQ9Y600 493 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 BRWD3Q6RI45 1802 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 HAT1O14929 419 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 MFN2O95140 757 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 PIRTP0C851 137 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 CXCR2P25025 360 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 FAM174BQ3ZCQ3 159 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 RFTN2Q52LD8 501 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-214ENST00000528165 CPZQ66K79 652 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 TAPT1Q6NXT6 567 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 LETMD1Q6P1Q0 360 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 SAPCD2Q86UD0 394 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 GPSM1Q86YR5 675 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 PEX13Q92968 403 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 TP53INP1Q96A56 240 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 DDX28Q9NUL7 540 aaKnown RBP14.39□□□□□ -0.11
CAPN1-214ENST00000528165 VNN3Q9NY84 501 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 IPPQ9Y573 584 aa14.39□□□□□ -0.11
CAPN1-214ENST00000528165 LOC285095A0A1B0GVY8 99 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 PDZK1P1A8MUH7 402 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 TNFRSF10AO00220 468 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 MED26O95402 600 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 HOXB6P17509 224 aaKnown RBP14.38□□□□□ -0.11
CAPN1-214ENST00000528165 PPP3CCP48454 512 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 NRIP1P48552 1158 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 EIF4EBP2Q13542 120 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-214ENST00000528165 GTF2H3Q13889 308 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 MAD2L1BPQ15013 274 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-214ENST00000528165 TYSND1Q2T9J0 566 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 SETMARQ53H47 684 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-214ENST00000528165 GDPD3Q7L5L3 318 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 NETO1Q8TDF5 533 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 IPCEF1Q8WWN9 437 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-214ENST00000528165 MYLPFQ96A32 169 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 SLC10A4Q96EP9 437 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 PYURFQ96I23 114 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 ZFP42Q96MM3 310 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 CSNK1G1Q9HCP0 422 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 RASSF1Q9NS23 344 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.38□□□□□ -0.11
CAPN1-214ENST00000528165 MED16Q9Y2X0 877 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 PCDHGA3Q9Y5H0 932 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 N6AMT1Q9Y5N5 214 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 HS3ST4Q9Y661 456 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 TBKBP1A7MCY6 615 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 HOXC11O43248 304 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-214ENST00000528165 USP2O75604 605 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-214ENST00000528165 HAPLN1P10915 354 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-214ENST00000528165 SLC2A4P14672 509 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 KRT20P35900 424 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 MRPS15P82914 257 aaKnown RBP14.38□□□□□ -0.11
CAPN1-214ENST00000528165 NRG1Q02297 640 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-214ENST00000528165 PRKCDQ05655 676 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 KIAA0040Q15053 153 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 UBXN11Q5T124 520 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 ZDHHC21Q8IVQ6 265 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 PHACTR4Q8IZ21 702 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 CELF2-AS1Q8N7Q2 184 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 TTC29Q8NA56 475 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-214ENST00000528165 OR10Q1Q8NGQ4 319 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 CDK5RAP1Q96SZ6 601 aaKnown RBP14.38□□□□□ -0.11
CAPN1-214ENST00000528165 BARD1Q99728 777 aaKnown RBP14.38□□□□□ -0.11
CAPN1-214ENST00000528165 REXO4Q9GZR2 422 aaKnown RBP14.38□□□□□ -0.11
CAPN1-214ENST00000528165 RBPJLQ9UBG7 517 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 TMA7Q9Y2S6 64 aaKnown RBP14.38□□□□□ -0.11
CAPN1-214ENST00000528165 A3GALT2U3KPV4 340 aa14.38□□□□□ -0.11
CAPN1-214ENST00000528165 MYO1GB0I1T2 1018 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 PTGESO14684 152 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 NDUFS3O75489 264 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 LIPAP38571 399 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 ADCYAP1R1P41586 468 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 DAPP51397 102 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 GALNT3Q14435 633 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 PTGR1Q14914 329 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 CHPFQ8IZ52 775 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 ASCC1Q8N9N2 400 aaKnown RBP14.37□□□□□ -0.11
CAPN1-214ENST00000528165 IL17RDQ8NFM7 739 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 OR7G1Q8NGA0 311 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms