RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 S1PR5Q9H228 398 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 RETREG1Q9H6L5 497 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 TASP1Q9H6P5 420 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 ZNF334Q9HCZ1 680 aaPredicted RBP4.54□□□□□ -1.68
USP48-211ENST00000526044 OLA1Q9NTK5 396 aaKnown RBP4.54□□□□□ -1.68
USP48-211ENST00000526044 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.54□□□□□ -1.68
USP48-211ENST00000526044 TMEM51Q9NW97 253 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 OSER1Q9NX31 292 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 MTMR10Q9NXD2 777 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 RRN3Q9NYV6 651 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 LCMT1Q9UIC8 334 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 ANAPC7Q9UJX3 599 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 STAP1Q9ULZ2 295 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 GUCA1BQ9UMX6 200 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 VPS4AQ9UN37 437 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 COG5Q9UP83 839 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 BTBD3Q9Y2F9 522 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 MYO16Q9Y6X6 1858 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 DOCK6Q96HP0 2047 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 NOTCH4Q99466 2003 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 SYNJ2BP-COX16A0A087WUM0 186 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 TRAV19A0A0A6YYK7 116 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.53□□□□□ -1.68
USP48-211ENST00000526044 A0A0U1RQJ8 604 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 TMEM110-MUSTN1A8MSY1 372 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 J3KRW8 73 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 J3KTA2 159 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 FCHO1O14526 889 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 CTIFO43310 598 aaKnown RBP4.53□□□□□ -1.68
USP48-211ENST00000526044 KIF5CO60282 957 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 DAB1O75553 588 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 MTA2O94776 668 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 PROSCO94903 275 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 MOCS3O95396 460 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 TRUB2O95900 331 aaKnown RBP4.53□□□□□ -1.68
USP48-211ENST00000526044 TBX18O95935 607 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 MBL2P11226 248 aaPredicted RBP4.53□□□□□ -1.68
USP48-211ENST00000526044 GJA1P17302 382 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 MATN1P21941 496 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 ATP5F1P24539 256 aaPredicted RBP4.53□□□□□ -1.68
USP48-211ENST00000526044 MSNP26038 577 aaKnown RBP4.53□□□□□ -1.68
USP48-211ENST00000526044 TACR3P29371 465 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 CCR2P41597 374 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 SLC1A1P43005 524 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 SSR1P43307 286 aaKnown RBP4.53□□□□□ -1.68
USP48-211ENST00000526044 PTPN9P43378 593 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 MAPK9P45984 424 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 SULT1E1P49888 294 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 HADHBP55084 474 aaKnown RBP4.53□□□□□ -1.68
USP48-211ENST00000526044 KRTAP10-9P60411 292 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 NTHL1P78549 312 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 COG7P83436 770 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 NME3Q13232 169 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 CSHL1Q14406 222 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 SEC23BQ15437 767 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 TEAD2Q15562 447 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 CNGA3Q16281 694 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 HADHQ16836 314 aaKnown RBP4.53□□□□□ -1.68
USP48-211ENST00000526044 CDO1Q16878 200 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 C15orf59Q2T9L4 293 aaPredicted RBP4.53□□□□□ -1.68
USP48-211ENST00000526044 CCDC92Q53HC0 331 aaPredicted RBP4.53□□□□□ -1.68
USP48-211ENST00000526044 WDR45BQ5MNZ6 344 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 TXNDC8Q6A555 127 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 ANO7Q6IWH7 933 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 SCYL2Q6P3W7 929 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 ACSM6Q6P461 480 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 SLC2A7Q6PXP3 512 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 TMEM150AQ86TG1 271 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 TMC8Q8IU68 726 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 SYCE1Q8N0S2 351 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 ARL14EPQ8N8R7 260 aaPredicted RBP4.53□□□□□ -1.68
USP48-211ENST00000526044 MAB21L3Q8N8X9 362 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 OR52L2PQ8NGH6 319 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 FAM172AQ8WUF8 416 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 CENPIQ92674 756 aaPredicted RBP4.53□□□□□ -1.68
USP48-211ENST00000526044 NT5C3BQ969T7 300 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 PGAP3Q96FM1 320 aaPredicted RBP4.53□□□□□ -1.68
USP48-211ENST00000526044 TMEM41AQ96HV5 264 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 PIWIL1Q96J94 861 aaKnown RBP4.53□□□□□ -1.68
USP48-211ENST00000526044 CFAP57Q96MR6 1250 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 NPY6RQ99463 290 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 TRIM7Q9C029 511 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 TRPC7Q9HCX4 862 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 WDR6Q9NNW5 1121 aaKnown RBP4.53□□□□□ -1.68
USP48-211ENST00000526044 GKN1Q9NS71 199 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 ARL8BQ9NVJ2 186 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 COX16Q9P0S2 106 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 KLHL13Q9P2N7 655 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 TRIM10Q9UDY6 481 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 SLC12A6Q9UHW9 1150 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 CD207Q9UJ71 328 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 RASAL2Q9UJF2 1139 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 HEMK1Q9Y5R4 338 aaPredicted RBP4.53□□□□□ -1.68
USP48-211ENST00000526044 ALG6Q9Y672 507 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 OBSL1O75147 1896 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 C2orf16Q68DN1 1984 aa4.53□□□□□ -1.68
USP48-211ENST00000526044 CLUHO75153 1309 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 MYO7AQ13402 2215 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 CCDC187A0A096LP49 1063 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 USP27XA6NNY8 438 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms