RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 ATP6V1E1P36543 226 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 PPARGP37231 505 aaPredicted RBP3.08□□□□□ -1.92
CSDE1-209ENST00000525132 PSMB10P40306 273 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 GPD2P43304 727 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 GSTM5P46439 218 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 PDE6CP51160 858 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 PMS2P54278 862 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 SNAP25P60880 206 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 CCNIQ14094 377 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 MED22Q15528 200 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 CD300EQ496F6 205 aaPredicted RBP3.08□□□□□ -1.92
CSDE1-209ENST00000525132 KLHL22Q53GT1 634 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 DEPDC1Q5TB30 811 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 RUSC1-AS1Q66K80 236 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 ANKRD40Q6AI12 368 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 CYP20A1Q6UW02 462 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 OLFML1Q6UWY5 402 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 TMEM108Q6UXF1 575 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 ADAMTSL5Q6ZMM2 481 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 FAM228AQ86W67 206 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 CEP57L1Q8IYX8 460 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 OR8H3Q8N146 312 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 SCML4Q8N228 414 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 FSTL5Q8N475 847 aaPredicted RBP3.08□□□□□ -1.92
CSDE1-209ENST00000525132 CARNMT1Q8N4J0 409 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 ZNF366Q8N895 744 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 C11orf44Q8N8P7 122 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 MYCBPAPQ8TBZ2 947 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 TMEM171Q8WVE6 324 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 RUFY2Q8WXA3 655 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 SHC3Q92529 594 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 NCSTNQ92542 709 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 SLC9A6Q92581 669 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 RFKQ969G6 155 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 VOPP1Q96AW1 172 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 SAAL1Q96ER3 474 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 PIGSQ96S52 555 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 CD180Q99467 661 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 EIF3CQ99613 913 aaKnown RBP3.08□□□□□ -1.92
CSDE1-209ENST00000525132 NCAPGQ9BPX3 1015 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 PTDSS2Q9BVG9 487 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 ZCWPW1Q9H0M4 648 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 RABEP2Q9H5N1 569 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 CXorf36Q9H7Y0 433 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 XAB2Q9HCS7 855 aaKnown RBP3.08□□□□□ -1.92
CSDE1-209ENST00000525132 SEMA4BQ9NPR2 832 aaPredicted RBP3.08□□□□□ -1.92
CSDE1-209ENST00000525132 AGPAT4Q9NRZ5 378 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 MED29Q9NX70 200 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 ALKBH4Q9NXW9 302 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 CHORDC1Q9UHD1 332 aaPredicted RBP3.08□□□□□ -1.92
CSDE1-209ENST00000525132 VPS51Q9UID3 782 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 SUFUQ9UMX1 484 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 RCE1Q9Y256 329 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 SLC27A6Q9Y2P4 619 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 NOX1Q9Y5S8 564 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 HRNRQ86YZ3 2850 aaPredicted RBP3.08□□□□□ -1.92
CSDE1-209ENST00000525132 INTS1Q8N201 2190 aaKnown RBP3.08□□□□□ -1.92
CSDE1-209ENST00000525132 PKHD1P08F94 4074 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 TBC1D3DA0A087WVF3 549 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 TBC1D3IA0A087WXS9 549 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 TBC1D3EA0A087X179 549 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 TBC1D3KA0A087X1G2 549 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 LY6G6EA0A0G2JKS1 128 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 A0A0U1RQF3 1178 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 C17orf113A0A1B0GUU1 675 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 TBC1D3FA6NER0 549 aaPredicted RBP3.07□□□□□ -1.92
CSDE1-209ENST00000525132 LIPT2A6NK58 231 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 TBC1D3LB9A6J9 549 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 M0QYT0 321 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 MPPED1O15442 326 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 YKT6O15498 198 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 RAMP2O60895 175 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 HEXIM1O94992 359 aaKnown RBP3.07□□□□□ -1.92
CSDE1-209ENST00000525132 KAT7O95251 611 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 TBC1D3HP0C7X1 549 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 ATP6V1B1P15313 513 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 CHN1P15882 459 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 FBLP22087 321 aaKnown RBP3.07□□□□□ -1.92
CSDE1-209ENST00000525132 CD82P27701 267 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 RBL1P28749 1068 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 PPIFP30405 207 aaKnown RBP3.07□□□□□ -1.92
CSDE1-209ENST00000525132 THBS4P35443 961 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 UGT1A3P35503 534 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 PNPLA4P41247 253 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 GARSP41250 739 aaKnown RBP3.07□□□□□ -1.92
CSDE1-209ENST00000525132 FOLR3P41439 243 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 AVPR1BP47901 424 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 CPA2P48052 419 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 ARRB1P49407 418 aaPredicted RBP3.07□□□□□ -1.92
CSDE1-209ENST00000525132 HMGA2P52926 109 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 UFM1P61960 85 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 WASHC5Q12768 1159 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 EIF3IQ13347 325 aaKnown RBP3.07□□□□□ -1.92
CSDE1-209ENST00000525132 E2F2Q14209 437 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 NAA25Q14CX7 972 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 USP41Q3LFD5 358 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 SPDYE7PQ495Y7 208 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 ZNF766Q5HY98 468 aa3.07□□□□□ -1.92
CSDE1-209ENST00000525132 PLEKHS1Q5SXH7 462 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms