RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 TSR3Q9UJK0 312 aaKnown RBP5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 SLC39A10Q9ULF5 831 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 TEX264Q9Y6I9 313 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 DOCK9Q9BZ29 2069 aa5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 PRAMEF33A0A0G2JMD5 474 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 ESYT3A0FGR9 886 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 PIPSLA2A3N6 862 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 TLCD2A6NGC4 264 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 EFCAB7A8K855 629 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 B4E171 279 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 BHMG1C9JSJ3 638 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 AGRPO00253 132 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 EIF3FO00303 357 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 GPC4O75487 556 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 DXOO77932 396 aaKnown RBP5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 C9P02748 559 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 HOXB3P14651 431 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 POLR2CP19387 275 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 CDH3P22223 829 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 MPSTP25325 297 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 CD82P27701 267 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 ACADLP28330 430 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 HSD17B2P37059 387 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 TSPAN7P41732 249 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 MAGEA4P43358 317 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 LEPRP48357 1165 aaKnown RBP5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 SEPHS1P49903 392 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 RAB28P51157 221 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 PDX1P52945 283 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 GFERP55789 205 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 FOXM1Q08050 763 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 ABRQ12979 859 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 NAB1Q13506 487 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 CAMK2BQ13554 666 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 NAA25Q14CX7 972 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 C16orf72Q14CZ0 275 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 FASTKD3Q14CZ7 662 aaKnown RBP5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 ST3GAL2Q16842 350 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 ZNF658BQ4V348 819 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 DCAF12Q5T6F0 453 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 BROXQ5VW32 411 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 FAM45BPQ6NSW5 357 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 CNSTQ6PJW8 725 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 IGF2-ASQ6U949 168 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 CEACAM20Q6UY09 585 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 FAM92BQ6ZTR7 304 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 C3orf62Q6ZUJ4 267 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 NEK10Q6ZWH5 1172 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 PRSS42Q7Z5A4 293 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 STRA8Q7Z7C7 330 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 KMT5CQ86Y97 462 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 IGDCC3Q8IVU1 814 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 CTAGE3PQ8IX95 158 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 IFT20Q8IY31 132 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 UNC5BQ8IZJ1 945 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 MYO1HQ8N1T3 1032 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 AGGF1Q8N302 714 aaeCLIP5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 SIDT2Q8NBJ9 832 aaKnown RBP5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 NOA1Q8NC60 698 aaKnown RBP5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 RCBTB1Q8NDN9 531 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 ZNF248Q8NDW4 579 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 OR5AR1Q8NGP9 310 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 MDM1Q8TC05 714 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 FAM45AQ8TCE6 357 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 LKAAEAR1Q8TD35 194 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 JPH3Q8WXH2 748 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 IFT81Q8WYA0 676 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 INPP5DQ92835 1189 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 FGF11Q92914 225 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 RAD51AP1Q96B01 352 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 SLC22A18Q96BI1 424 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 TSPAN17Q96FV3 270 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 ELMO2Q96JJ3 720 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 PWWP2AQ96N64 755 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 BIRC8Q96P09 236 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 DCBLD2Q96PD2 775 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 TEFMQ96QE5 360 aaKnown RBP5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 TAAR9Q96RI9 348 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 FMO2Q99518 471 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 NDNQ99608 321 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 ZPBPQ9BS86 351 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 AARSD1Q9BTE6 412 aaKnown RBP5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 DDA1Q9BW61 102 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 TRIM54Q9BYV2 358 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 B3GNT4Q9C0J1 378 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 ZNF768Q9H5H4 540 aaKnown RBP5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 TFB2MQ9H5Q4 396 aaKnown RBP5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 INTS7Q9NVH2 962 aaKnown RBP5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 SLC39A1Q9NY26 324 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 OR6C2Q9NZP2 312 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 TMEM9Q9P0T7 183 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 PCDHGA7Q9Y5G6 932 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 IKBKGQ9Y6K9 419 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 CFAP54Q96N23 3096 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 FRYLO94915 3013 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 CACNA1AO00555 2505 aa5.25□□□□□ -1.57
HMGB1P40-201ENST00000525121 CABIN1Q9Y6J0 2220 aa5.24□□□□□ -1.57
HMGB1P40-201ENST00000525121 TCRBV9S1A1TA0A576 114 aa5.24□□□□□ -1.57
HMGB1P40-201ENST00000525121 ISM1B1AKI9 464 aa5.24□□□□□ -1.57
HMGB1P40-201ENST00000525121 STMND1H3BQB6 276 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms