RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 MYO18AQ92614 2054 aaKnown RBP3.04□□□□□ -1.92
CSDE1-208ENST00000524652 ANKRD36A6QL64 1941 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 ITIH6Q6UXX5 1313 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 WDFY3Q8IZQ1 3526 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 HELZ2Q9BYK8 2649 aaKnown RBP3.03□□□□□ -1.92
CSDE1-208ENST00000524652 TRBV5-7A0A0A0MS05 114 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 A0A1B0GUV1 79 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 A0A1B0GVT2 93 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 LRRC53A6NM62 1247 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 A8MXQ7 604 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 HHLA1C9JL84 531 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 F8VZ95 297 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 GOLGA6L19H0YKK7 550 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 M0QYT0 321 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 STX10O60499 249 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 HUS1O60921 280 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 N4BP1O75113 896 aaKnown RBP3.03□□□□□ -1.92
CSDE1-208ENST00000524652 RFPL2O75678 378 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 ADCY5O95622 1261 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 CAVIN2O95810 425 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 GLUD1P00367 558 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 SERPINC1P01008 464 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 URODP06132 367 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 PLEKP08567 350 aaPredicted RBP3.03□□□□□ -1.92
CSDE1-208ENST00000524652 CHRNB2P17787 502 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 TYMPP19971 482 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 TNFSF4P23510 183 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 BDNFP23560 247 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 CYP2F1P24903 491 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 CASP14P31944 242 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 OR1D2P34982 312 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 CA8P35219 290 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 PNPLA4P41247 253 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 NRIP1P48552 1158 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 PGFP49763 221 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 ZNF75DP51815 510 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 ARPP19P56211 112 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 POLE2P56282 527 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 POLR2FP61218 127 aaKnown RBP3.03□□□□□ -1.92
CSDE1-208ENST00000524652 RPL15P61313 204 aaKnown RBP3.03□□□□□ -1.92
CSDE1-208ENST00000524652 TNNC1P63316 161 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 ABATP80404 500 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 YWHAHQ04917 246 aaPredicted RBP3.03□□□□□ -1.92
CSDE1-208ENST00000524652 UBE3AQ05086 875 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 TRAF2Q12933 501 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 TBX2Q13207 712 aaPredicted RBP3.03□□□□□ -1.92
CSDE1-208ENST00000524652 GPR17Q13304 367 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 SMC1AQ14683 1233 aaKnown RBP3.03□□□□□ -1.92
CSDE1-208ENST00000524652 DRAP1Q14919 205 aaPredicted RBP3.03□□□□□ -1.92
CSDE1-208ENST00000524652 IZUMO4Q1ZYL8 232 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 KRTAP27-1Q3LI81 207 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 CTXN3Q4LDR2 81 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 SLC39A12Q504Y0 691 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 MDH1BQ5I0G3 518 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 FAM209BQ5JX69 171 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 SDHAF4Q5VUM1 108 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 SLC8B1Q6J4K2 584 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 ZNF280DQ6N043 979 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 C8orf82Q6P1X6 216 aaPredicted RBP3.03□□□□□ -1.92
CSDE1-208ENST00000524652 WDR59Q6PJI9 974 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 TMEM270Q6UE05 265 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 CLEC20AQ6ZU45 233 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 ACOT1Q86TX2 421 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 SLC47A2Q86VL8 602 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 PALB2Q86YC2 1186 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 CRYBG2Q8N1P7 616 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 WDTC1Q8N5D0 677 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 ATAD1Q8NBU5 361 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 APPL2Q8NEU8 664 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 SLC20A1Q8WUM9 679 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 TAF4BQ92750 862 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 ZNF566Q969W8 418 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 MYLPFQ96A32 169 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 MRPL38Q96DV4 380 aaKnown RBP3.03□□□□□ -1.92
CSDE1-208ENST00000524652 MCRS1Q96EZ8 462 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 PCED1BQ96HM7 432 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 REXO5Q96IC2 774 aaKnown RBP3.03□□□□□ -1.92
CSDE1-208ENST00000524652 PIWIL1Q96J94 861 aaKnown RBP3.03□□□□□ -1.92
CSDE1-208ENST00000524652 PGLYRP2Q96PD5 576 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 KCNK16Q96T55 309 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 PCDHB18PQ96TA0 734 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 TBCBQ99426 244 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 SYT15Q9BQS2 421 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 ACBD6Q9BR61 282 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 SYT11Q9BT88 431 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 LMAN2LQ9H0V9 348 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 GRPEL1Q9HAV7 217 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 ZNF334Q9HCZ1 680 aaPredicted RBP3.03□□□□□ -1.92
CSDE1-208ENST00000524652 UBE2TQ9NPD8 197 aaPredicted RBP3.03□□□□□ -1.92
CSDE1-208ENST00000524652 PLCB1Q9NQ66 1216 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 ENTPD7Q9NQZ7 604 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 FAM49BQ9NUQ9 324 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 FNIP2Q9P278 1114 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 NOCTQ9UK39 431 aaKnown RBP3.03□□□□□ -1.92
CSDE1-208ENST00000524652 FBXW11Q9UKB1 542 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 ICAM5Q9UMF0 924 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 BARX2Q9UMQ3 279 aaPredicted RBP3.03□□□□□ -1.92
CSDE1-208ENST00000524652 PCDHGB1Q9Y5G3 927 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 MAP1BP46821 2468 aaKnown RBP3.03□□□□□ -1.92
CSDE1-208ENST00000524652 SMG1Q96Q15 3661 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms