RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, human

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-222	ENST00000524226	TCRBV7S3A2	A0A539	114 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	TCRBV21S2A2	A0A5A6	115 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	PTGES3L	E9PB15	166 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226		H3BUI4	141 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	RNASEH2A	O75792	299 aa	Known RBP	2.55	□□□□□ -2
PCM1-222	ENST00000524226	RSL1D1	O76021	490 aa	Known RBP	2.55	□□□□□ -2
PCM1-222	ENST00000524226	CCNB2	O95067	398 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	OAZ2	O95190	189 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	APOL3	O95236	402 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	SERPINA3	P01011	423 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	MTHFD1	P11586	935 aa	Known RBP	2.55	□□□□□ -2
PCM1-222	ENST00000524226	STOM	P27105	288 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	OR1D2	P34982	312 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	RPA3	P35244	121 aa	Predicted RBP	2.55	□□□□□ -2
PCM1-222	ENST00000524226	RPL4	P36578	427 aa	Known RBP	2.55	□□□□□ -2
PCM1-222	ENST00000524226	SLC11A1	P49279	550 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	MYBPC1	Q00872	1141 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	FOXM1	Q08050	763 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	FAAP100	Q0VG06	881 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	SMAD4	Q13485	552 aa	Known RBP	2.55	□□□□□ -2
PCM1-222	ENST00000524226	MAPKAPK3	Q16644	382 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	ITPRIPL2	Q3MIP1	535 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	LACTB2	Q53H82	288 aa	Predicted RBP	2.55	□□□□□ -2
PCM1-222	ENST00000524226	KLHL26	Q53HC5	615 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	RAB6C	Q53S08	254 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	PLEKHG4	Q58EX7	1191 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	ARSJ	Q5FYB0	599 aa	Predicted RBP	2.55	□□□□□ -2
PCM1-222	ENST00000524226	PCID2	Q5JVF3	399 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	ARMC12	Q5T9G4	340 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	EMC10	Q5UCC4	262 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	PIK3R6	Q5UE93	754 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	LYSMD4	Q5XG99	296 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	TPGS2	Q68CL5	300 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	PM20D1	Q6GTS8	502 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	SULT1C3	Q6IMI6	304 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	TRNP1	Q6NT89	227 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	ZCCHC12	Q6PEW1	402 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	AFTPH	Q6ULP2	937 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	UNC5A	Q6ZN44	842 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	ZNF621	Q6ZSS3	439 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	LIMS2	Q7Z4I7	341 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	MCEMP1	Q8IX19	187 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	SAMD14	Q8IZD0	417 aa	Predicted RBP	2.55	□□□□□ -2
PCM1-222	ENST00000524226	DSEL	Q8IZU8	1212 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	ZNF567	Q8N184	647 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	AVL9	Q8NBF6	648 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	CEP76	Q8TAP6	659 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	WFIKKN2	Q8TEU8	576 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	SLC44A1	Q8WWI5	657 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	OVCA2	Q8WZ82	227 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	FAM3C	Q92520	227 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	TESC	Q96BS2	214 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	PLD4	Q96BZ4	506 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	FCRL2	Q96LA5	508 aa	Predicted RBP	2.55	□□□□□ -2
PCM1-222	ENST00000524226	CCDC115	Q96NT0	180 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	PLEKHG4B	Q96PX9	1271 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	CDRT15	Q96T59	188 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	HGH1	Q9BTY7	390 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	ADAM33	Q9BZ11	813 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	POLR1E	Q9GZS1	481 aa	Known RBP	2.55	□□□□□ -2
PCM1-222	ENST00000524226	RAB6C	Q9H0N0	254 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	TRPV5	Q9NQA5	729 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	TMPRSS4	Q9NRS4	437 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	VPS45	Q9NRW7	570 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	DNAAF2	Q9NVR5	837 aa	Known RBP	2.55	□□□□□ -2
PCM1-222	ENST00000524226	RBM22	Q9NW64	420 aa	Known RBP eCLIP	2.55	□□□□□ -2	1e-6	■■■□□ 15.8
PCM1-222	ENST00000524226	CFAP97	Q9P2B7	532 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	NME7	Q9Y5B8	376 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	PCDHGA10	Q9Y5H3	936 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	ANK1	P16157	1881 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	CIT	O14578	2027 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	LOC100506127	A0A0U1RQW1	187 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	2.55	□□□□□ -2
PCM1-222	ENST00000524226	KCNU1	A8MYU2	1149 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	MCIDAS	D6RGH6	385 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226		H3BQ06	376 aa	Predicted RBP	2.55	□□□□□ -2
PCM1-222	ENST00000524226	KCNK1	O00180	336 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	DCLK1	O15075	740 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	NUAK1	O60285	661 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	APBB3	O95704	486 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	AP2A1	O95782	977 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	CYP17A1	P05093	508 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	EPHX1	P07099	455 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	HAPLN1	P10915	354 aa	Predicted RBP	2.55	□□□□□ -2
PCM1-222	ENST00000524226	RHOQ	P17081	205 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	PSMA1	P25786	263 aa	Known RBP	2.55	□□□□□ -2
PCM1-222	ENST00000524226	OR1E1	P30953	314 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	HOXC12	P31275	282 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	BMPR1A	P36894	532 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	ASMT	P46597	345 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	IDH2	P48735	452 aa	Known RBP	2.55	□□□□□ -2
PCM1-222	ENST00000524226	TAS2R50	P59544	299 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	PLIN5	Q00G26	463 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	IRF8	Q02556	426 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	ZNF33A	Q06730	810 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	BCL2L1	Q07817	233 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	RBBP4	Q09028	425 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	RASGEF1B	Q0VAM2	473 aa		2.55	□□□□□ -2
PCM1-222	ENST00000524226	PDK3	Q15120	406 aa		2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms