RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 FASLGP48023 281 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 POLD2P49005 469 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 GEMIN4P57678 1058 aaKnown RBP6.24□□□□□ -1.41
VPS13B-211ENST00000522802 ACTR1AP61163 376 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 RHOAP61586 193 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 GCNT1Q02742 428 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 DEUP1Q05D60 604 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 FOXM1Q08050 763 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 NFATC2Q13469 925 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 RAPSNQ13702 412 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 LAMB3Q13751 1172 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 ZRSR2Q15696 482 aaKnown RBP6.24□□□□□ -1.41
VPS13B-211ENST00000522802 RNF151Q2KHN1 245 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 PTPN20Q4JDL3 420 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 EFHC1Q5JVL4 640 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-211ENST00000522802 MANEALQ5VSG8 457 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 FAM69BQ5VUD6 431 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 SP5Q6BEB4 398 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-211ENST00000522802 ERAP2Q6P179 960 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 DOK6Q6PKX4 331 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 WDR74Q6RFH5 385 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-211ENST00000522802 C11orf57Q6ZUT1 292 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-211ENST00000522802 SLC26A9Q7LBE3 791 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 NLRP14Q86W24 1093 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 CBARPQ8N350 705 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-211ENST00000522802 FDCSPQ8NFU4 85 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 NCSTNQ92542 709 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 NT5C3BQ969T7 300 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 C1orf74Q96LT6 269 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 NCAPGQ9BPX3 1015 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 BRD8Q9H0E9 1235 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 ING2Q9H160 280 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 SEC61A2Q9H9S3 476 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 TRNAU1APQ9NX07 287 aaKnown RBP6.24□□□□□ -1.41
VPS13B-211ENST00000522802 LNPEPQ9UIQ6 1025 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 CNTN6Q9UQ52 1028 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 NTNG1Q9Y2I2 539 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 MFHAS1Q9Y4C4 1052 aa6.24□□□□□ -1.41
VPS13B-211ENST00000522802 MN1Q10571 1320 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-211ENST00000522802 hCG_2014768A0A024R1R8 64 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 CXorf51AA0A1B0GTR3 108 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 A0A1B0GVL5 298 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 BECN2A8MW95 431 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 A8MX80 341 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 FAM72CH0Y354 149 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 LRRTM2O43300 516 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 MED7O43513 233 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 BUB1O43683 1085 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 DPM1O60762 260 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 SEC24DO94855 1032 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-211ENST00000522802 LPLP06858 475 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 HOXC4P09017 264 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-211ENST00000522802 ANKRD34CP0C6C1 535 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 RGRP47804 291 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 SUOXP51687 545 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 RNASE9P60153 205 aaKnown RBP6.23□□□□□ -1.41
VPS13B-211ENST00000522802 HGFACQ04756 655 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 KLF1Q13351 362 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-211ENST00000522802 RAPGEF1Q13905 1077 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 MAN2A1Q16706 1144 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 MIIPQ5JXC2 388 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 FAM72AQ5TYM5 149 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 FAM72DQ6L9T8 149 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 RWDD4Q6NW29 188 aaKnown RBP6.23□□□□□ -1.41
VPS13B-211ENST00000522802 PNCKQ6P2M8 343 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 SPNS3Q6ZMD2 512 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 ARHGEF18Q6ZSZ5 1173 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 GDF7Q7Z4P5 450 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 PHLDB2Q86SQ0 1253 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 TRIM74Q86UV6 250 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 FAM72BQ86X60 149 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 FAM131BQ86XD5 332 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 CAMK1DQ8IU85 385 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 IQCKQ8N0W5 287 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 SFRP1Q8N474 314 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 ZNF606Q8WXB4 792 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 INPP5DQ92835 1189 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 NUS1Q96E22 293 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 PGAP3Q96FM1 320 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-211ENST00000522802 ZNF396Q96N95 335 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-211ENST00000522802 OR2M4Q96R27 311 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 OR6C1Q96RD1 312 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 TEX101Q9BY14 249 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 MAGEB5Q9BZ81 275 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 GTPBP4Q9BZE4 634 aaKnown RBP6.23□□□□□ -1.41
VPS13B-211ENST00000522802 AKIRIN1Q9H9L7 192 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-211ENST00000522802 PLCB1Q9NQ66 1216 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.23□□□□□ -1.413e-6■■■■□ 22.8
VPS13B-211ENST00000522802 ARMCX3Q9UH62 379 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-211ENST00000522802 SLC17A4Q9Y2C5 497 aa6.23□□□□□ -1.41
VPS13B-211ENST00000522802 PCYT1BQ9Y5K3 369 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-211ENST00000522802 MAP1AP78559 2803 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-211ENST00000522802 GOLGA6L3A6NEY3 463 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 A6NL46 340 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 C21orf140B9A014 251 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 F5H423 210 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-211ENST00000522802 MATN2O00339 956 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 E2F3O00716 465 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 KDELR3O43731 214 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms