RNA–Protein interactions for RNA: ENST00000522665.5

NDRG1-223, Transcript of N-myc downstream regulated 1, human

TSL 2

Gene NDRG1, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NDRG1-223	ENST00000522665	TFG	Q92734	400 aa	Predicted RBP	14.73	□□□□□ -0.05
NDRG1-223	ENST00000522665	RMDN2	Q96LZ7	410 aa		14.73	□□□□□ -0.05
NDRG1-223	ENST00000522665	C7orf26	Q96N11	449 aa		14.73	□□□□□ -0.05
NDRG1-223	ENST00000522665	ZNF317	Q96PQ6	595 aa	Predicted RBP	14.73	□□□□□ -0.05
NDRG1-223	ENST00000522665	TRMO	Q9BU70	441 aa		14.73	□□□□□ -0.05
NDRG1-223	ENST00000522665	GATA5	Q9BWX5	397 aa	Predicted RBP	14.73	□□□□□ -0.05
NDRG1-223	ENST00000522665	GSDMC	Q9BYG8	508 aa		14.73	□□□□□ -0.05
NDRG1-223	ENST00000522665	EPN3	Q9H201	632 aa		14.73	□□□□□ -0.05
NDRG1-223	ENST00000522665	WASH6P	Q9NQA3	447 aa		14.73	□□□□□ -0.05
NDRG1-223	ENST00000522665	THAP1	Q9NVV9	213 aa		14.73	□□□□□ -0.05
NDRG1-223	ENST00000522665	WWOX	Q9NZC7	414 aa		14.73	□□□□□ -0.05
NDRG1-223	ENST00000522665	ASF1A	Q9Y294	204 aa		14.73	□□□□□ -0.05
NDRG1-223	ENST00000522665	HEBP2	Q9Y5Z4	205 aa		14.73	□□□□□ -0.05
NDRG1-223	ENST00000522665	SLCO1B1	Q9Y6L6	691 aa		14.73	□□□□□ -0.05
NDRG1-223	ENST00000522665	BDP1	A6H8Y1	2624 aa		14.73	□□□□□ -0.05
NDRG1-223	ENST00000522665		A0A1B0GTW7	788 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	EDF1	O60869	148 aa	Known RBP	14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	SNN	O75324	88 aa	Predicted RBP	14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	C1orf105	O95561	183 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	HSPA4L	O95757	839 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	GUCA1C	O95843	209 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	CTSE	P14091	401 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	EEF1D	P29692	281 aa	Known RBP	14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	ACTR1B	P42025	376 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	NUBP1	P53384	320 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	ACTR1A	P61163	376 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	ABCE1	P61221	599 aa	Known RBP	14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	CTBS	Q01459	385 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	UAP1L1	Q3KQV9	507 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	PLK5	Q496M5	336 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	ZNF678	Q5SXM1	525 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	CAPRIN2	Q6IMN6	1127 aa	Known RBP	14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	FRMD7	Q6ZUT3	714 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	KIRREL3	Q8IZU9	778 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	GPBAR1	Q8TDU6	330 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	DLG3	Q92796	817 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	FBXL8	Q96CD0	374 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	CCDC138	Q96M89	665 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	C1QTNF3	Q9BXJ4	246 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	ZDHHC5	Q9C0B5	715 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	TMEM168	Q9H0V1	697 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	TRIT1	Q9H3H1	467 aa	Known RBP	14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	DNAJC28	Q9NX36	388 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	APOBEC3B	Q9UH17	382 aa	Known RBP	14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	PTBP2	Q9UKA9	531 aa	Known RBP	14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	PSMD13	Q9UNM6	376 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	PCDHGA2	Q9Y5H1	932 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	LRP4	O75096	1905 aa		14.72	□□□□□ -0.05
NDRG1-223	ENST00000522665	MYO1C	O00159	1063 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	TNFRSF10A	O00220	468 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	HR	O43593	1189 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	KDM1A	O60341	852 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	CSF2	P04141	144 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	RPS17	P08708	135 aa	Known RBP	14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	SP9	P0CG40	484 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	SLC2A4	P14672	509 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	NME1	P15531	152 aa	Known RBP	14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	JUND	P17535	347 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	ITPKA	P23677	461 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	RPL10	P27635	214 aa	Known RBP	14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	HOXD12	P35452	270 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	BDKRB1	P46663	353 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	SLC1A6	P48664	564 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	PIK3CG	P48736	1102 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	OCRL	Q01968	901 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	SRSF5	Q13243	272 aa	Known RBP	14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	PCBP2	Q15366	365 aa	Known RBP eCLIP	14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	ANGPT1	Q15389	498 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	ANKS6	Q68DC2	871 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	LAYN	Q6UX15	382 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	FAM47E	Q6ZV65	393 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	RABEPK	Q7Z6M1	372 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	TBC1D21	Q8IYX1	336 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	LRRC34	Q8IZ02	419 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	RAB42	Q8N4Z0	105 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	OR5K2	Q8NHB8	316 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	RHBDF1	Q96CC6	855 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	ZC3H10	Q96K80	434 aa	Known RBP	14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	CNDP1	Q96KN2	507 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	C12orf66	Q96MD2	445 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	PITPNM3	Q9BZ71	974 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	DRC3	Q9H069	523 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	EML4	Q9HC35	981 aa	Known RBP	14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	FGFR1OP2	Q9NVK5	253 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	PCOLCE2	Q9UKZ9	415 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	PNMA8B	Q9ULN7	279 aa	Predicted RBP	14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	STK38L	Q9Y2H1	464 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	PLEKHM1	Q9Y4G2	1056 aa		14.71	□□□□□ -0.05
NDRG1-223	ENST00000522665	CACNA1I	Q9P0X4	2223 aa		14.7	□□□□□ -0.06
NDRG1-223	ENST00000522665	CEP192	Q8TEP8	1941 aa		14.7	□□□□□ -0.06
NDRG1-223	ENST00000522665	ZNF839	A8K0R7	811 aa		14.7	□□□□□ -0.06
NDRG1-223	ENST00000522665	SCAMP1	O15126	338 aa		14.7	□□□□□ -0.06
NDRG1-223	ENST00000522665	SUPT7L	O94864	414 aa		14.7	□□□□□ -0.06
NDRG1-223	ENST00000522665	MLYCD	O95822	493 aa		14.7	□□□□□ -0.06
NDRG1-223	ENST00000522665	NDUFS1	P28331	727 aa		14.7	□□□□□ -0.06
NDRG1-223	ENST00000522665	SEC24C	P53992	1094 aa		14.7	□□□□□ -0.06
NDRG1-223	ENST00000522665	KRT33B	Q14525	404 aa		14.7	□□□□□ -0.06
NDRG1-223	ENST00000522665	ELOC	Q15369	112 aa		14.7	□□□□□ -0.06
NDRG1-223	ENST00000522665	SLC30A9	Q6PML9	568 aa		14.7	□□□□□ -0.06

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms