RNA–Protein interactions for RNA: ENST00000522045.5

SGCE-211, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-211ENST00000522045 DPPA4Q7L190 304 aa4.38□□□□□ -1.71
SGCE-211ENST00000522045 TMEM139Q8IV31 216 aa4.38□□□□□ -1.71
SGCE-211ENST00000522045 VSTM4Q8IW00 320 aa4.38□□□□□ -1.71
SGCE-211ENST00000522045 NKAPQ8N5F7 415 aaKnown RBP4.38□□□□□ -1.71
SGCE-211ENST00000522045 CCDC191Q8NCU4 936 aa4.38□□□□□ -1.71
SGCE-211ENST00000522045 DDHD1Q8NEL9 900 aa4.38□□□□□ -1.71
SGCE-211ENST00000522045 ZNF473Q8WTR7 871 aaKnown RBP4.38□□□□□ -1.71
SGCE-211ENST00000522045 SLC44A1Q8WWI5 657 aa4.38□□□□□ -1.71
SGCE-211ENST00000522045 HERVK_113Q902F9 699 aa4.38□□□□□ -1.71
SGCE-211ENST00000522045 TRIM63Q969Q1 353 aa4.38□□□□□ -1.71
SGCE-211ENST00000522045 ISCA1Q9BUE6 129 aa4.38□□□□□ -1.71
SGCE-211ENST00000522045 ZNF446Q9NWS9 450 aa4.38□□□□□ -1.71
SGCE-211ENST00000522045 CWC25Q9NXE8 425 aaPredicted RBP4.38□□□□□ -1.71
SGCE-211ENST00000522045 PPP1R14DQ9NXH3 145 aa4.38□□□□□ -1.71
SGCE-211ENST00000522045 IFNKQ9P0W0 207 aa4.38□□□□□ -1.71
SGCE-211ENST00000522045 MRPS28Q9Y2Q9 187 aaKnown RBP4.38□□□□□ -1.71
SGCE-211ENST00000522045 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.38□□□□□ -1.71
SGCE-211ENST00000522045 CLIC4Q9Y696 253 aa4.38□□□□□ -1.71
SGCE-211ENST00000522045 NHSL1Q5SYE7 1610 aa4.38□□□□□ -1.71
SGCE-211ENST00000522045 RGPD5Q99666 1765 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 A0A087WWV3 80 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 A0A087X002 238 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 KLF18A0A0U1RQI7 1052 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 A0A1B0GUL7 405 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 A0A1B0GVL5 298 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 TNPO2O14787 897 aaKnown RBP4.37□□□□□ -1.71
SGCE-211ENST00000522045 KCNN4O15554 427 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 NBNO60934 754 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 SMC2O95347 1197 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 TPM1P09493 284 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 PNMA6AP0CW24 399 aaPredicted RBP4.37□□□□□ -1.71
SGCE-211ENST00000522045 MYL6BP14649 208 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 ZNF18P17022 549 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 NR2F2P24468 414 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 ELF1P32519 619 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 APOBEC1P41238 236 aaKnown RBP4.37□□□□□ -1.71
SGCE-211ENST00000522045 SPOCK1Q08629 439 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 TBX2Q13207 712 aaPredicted RBP4.37□□□□□ -1.71
SGCE-211ENST00000522045 CAMK1Q14012 370 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 FGFBP1Q14512 234 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 IMMTQ16891 758 aaKnown RBP4.37□□□□□ -1.71
SGCE-211ENST00000522045 SLC9B1Q4ZJI4 515 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 TCTE1Q5JU00 501 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 CCDC158Q5M9N0 1113 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 C10orf62Q5T681 223 aaPredicted RBP4.37□□□□□ -1.71
SGCE-211ENST00000522045 RESP18Q5W5W9 173 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 ZNF440Q8IYI8 595 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 TTC5Q8N0Z6 440 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 NCOA7Q8NI08 942 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 SENP5Q96HI0 755 aaPredicted RBP4.37□□□□□ -1.71
SGCE-211ENST00000522045 POM121L2Q96KW2 1035 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 ACOX2Q99424 681 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 FUZQ9BT04 418 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 ZBTB20Q9HC78 741 aaPredicted RBP4.37□□□□□ -1.71
SGCE-211ENST00000522045 LTB4R2Q9NPC1 389 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 ARGLU1Q9NWB6 273 aaPredicted RBP4.37□□□□□ -1.71
SGCE-211ENST00000522045 ORC3Q9UBD5 711 aaPredicted RBP4.37□□□□□ -1.71
SGCE-211ENST00000522045 CACNG5Q9UF02 275 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 PLCH1Q4KWH8 1693 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 CDHR2Q9BYE9 1310 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 TOGARAM1Q9Y4F4 1720 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 DISP2A7MBM2 1401 aa4.37□□□□□ -1.71
SGCE-211ENST00000522045 RREB1Q92766 1687 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 LRRC53A6NM62 1247 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 FAM90A26D6RGX4 464 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 ANKRD28O15084 1053 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 LDLRAD4O15165 306 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 ZSCAN12O43309 604 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 BUD23O43709 281 aaKnown RBP4.36□□□□□ -1.71
SGCE-211ENST00000522045 WDHD1O75717 1129 aaPredicted RBP4.36□□□□□ -1.71
SGCE-211ENST00000522045 TSHBP01222 138 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 DPEP1P16444 411 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 SYKP43405 635 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 CEBPZQ03701 1054 aaKnown RBP4.36□□□□□ -1.71
SGCE-211ENST00000522045 ALX1Q15699 326 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 SPINK14Q6IE38 97 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 SYT10Q6XYQ8 523 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 RSRC2Q7L4I2 434 aaKnown RBP4.36□□□□□ -1.71
SGCE-211ENST00000522045 CPOQ8IVL8 374 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 CCDC13Q8IYE1 715 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 TRIML1Q8N9V2 468 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 RBM15BQ8NDT2 890 aaKnown RBP4.36□□□□□ -1.71
SGCE-211ENST00000522045 RDM1Q8NG50 284 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 HARBI1Q96MB7 349 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 SDF4Q9BRK5 362 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 GPR63Q9BZJ6 419 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 RAD21L1Q9H4I0 556 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 SLC6A13Q9NSD5 602 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 TRMT1Q9NXH9 659 aaKnown RBP4.36□□□□□ -1.71
SGCE-211ENST00000522045 RASAL2Q9UJF2 1139 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 DOCK2Q92608 1830 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 PCDH11XQ9BZA7 1347 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 PCDH11YQ9BZA8 1340 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 MYH7P12883 1935 aa4.36□□□□□ -1.71
SGCE-211ENST00000522045 COL5A2P05997 1499 aaPredicted RBP4.36□□□□□ -1.71
SGCE-211ENST00000522045 CICQ96RK0 1608 aaPredicted RBP4.35□□□□□ -1.71
SGCE-211ENST00000522045 ABCA3Q99758 1704 aa4.35□□□□□ -1.71
SGCE-211ENST00000522045 A6NL46 340 aa4.35□□□□□ -1.71
SGCE-211ENST00000522045 DUXAA6NLW8 204 aa4.35□□□□□ -1.71
SGCE-211ENST00000522045 ANKRD66B4E2M5 251 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms