RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 ISM2Q6H9L7 571 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 RHBDD2Q6NTF9 364 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 KLHL35Q6PF15 583 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 C3P1Q6ZMU1 363 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 CDHR3Q6ZTQ4 885 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 LRRTM4Q86VH4 590 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 SPPL2CQ8IUH8 684 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 FAM20CQ8IXL6 584 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 CARFQ8N187 725 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 DNAAF3Q8N9W5 541 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 LRRN4CLQ8ND94 238 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 SLC30A5Q8TAD4 765 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 HAS2Q92819 552 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 NACC2Q96BF6 587 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 TRIM11Q96F44 468 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 THOC3Q96J01 351 aaKnown RBP8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 ZNF599Q96NL3 588 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 GSDMAQ96QA5 445 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 ALPK1Q96QP1 1244 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 LYSMD1Q96S90 227 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 SPRTNQ9H040 489 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 KLHL25Q9H0H3 589 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 FAM60AQ9NP50 221 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 DHCR7Q9UBM7 475 aaKnown RBP8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 SERTAD3Q9UJW9 196 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 POMT2Q9UKY4 750 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 CFAP45Q9UL16 551 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 PSMD13Q9UNM6 376 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 CHKBQ9Y259 395 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 PLEKHA6Q9Y2H5 1048 aa8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 CFAP20Q9Y6A4 193 aaKnown RBP8.55□□□□□ -1.04
TRAPPC9-212ENST00000521944 TRAV17A0A0B4J275 112 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 GPR89AB7ZAQ6 455 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 E7EQ34 232 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 PSMA7O14818 248 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 VEGFDO43915 354 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 MAFKO60675 156 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 ICMTO60725 284 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 PRAMEF2O60811 474 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 TOXO94900 526 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 CYP1A1P04798 512 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 GPR89BP0CG08 455 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 PVRP15151 417 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 CHRNB2P17787 502 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 POLR2CP19387 275 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 GPD1P21695 349 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 UGT1A4P22310 534 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 PCSK6P29122 969 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 HSPA9P38646 679 aaKnown RBP8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 GABRA4P48169 554 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 KRT85P78386 507 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 ARG2P78540 354 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 DCDP81605 110 aaKnown RBP8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 HYAL2Q12891 473 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 PCOLCEQ15113 449 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 EXOC3L4Q17RC7 722 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 NKAIN1Q4KMZ8 207 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 GPR26Q8NDV2 337 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 OR11G2Q8NGC1 345 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 SLC20A1Q8WUM9 679 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 SDCCAG3Q96C92 435 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 ZNF559Q9BR84 538 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 C11orf70Q9BRQ4 267 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 PITPNM3Q9BZ71 974 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 UCK2Q9BZX2 261 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 PDCL3Q9H2J4 239 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 FANCEQ9HB96 536 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 ZFYVE1Q9HBF4 777 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 CBX8Q9HC52 389 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 SYTL2Q9HCH5 934 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 RMND1Q9NWS8 449 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 IFT80Q9P2H3 777 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 SLC24A2Q9UI40 661 aa8.54□□□□□ -1.04
TRAPPC9-212ENST00000521944 C1orf232A0A0U1RR37 186 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 C17orf113A0A1B0GUU1 675 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 NKX2-6A6NCS4 301 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 EEF2KO00418 725 aaKnown RBP8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 CTAG2O75638 210 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 CDK14O94921 469 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 RASAL1O95294 804 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 CRYABP02511 175 aaKnown RBP8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 MTHFD1P11586 935 aaKnown RBP8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 KRT3P12035 628 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 NID1P14543 1247 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 PRDX3P30048 256 aaKnown RBP8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 HOXC12P31275 282 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 HTR7P34969 479 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 ZNF143P52747 638 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 CASP6P55212 293 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 BPIFB4P59827 614 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 RPL7AP62424 266 aaKnown RBP8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 YBX1P67809 324 aaKnown RBP8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 OGDHQ02218 1023 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 RBPJQ06330 500 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 ZIC1Q15915 447 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 RALGPS1Q5JS13 557 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 KLHL10Q6JEL2 608 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 GBP6Q6ZN66 633 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 RFX8Q6ZV50 586 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 CYP4V2Q6ZWL3 525 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms