RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 FAM106CPP0CH98 169 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 SMIM18P0DKX4 95 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 CBLP22681 906 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 PSMB4P28070 264 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 ABCG1P45844 678 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 PDLIM4P50479 330 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 PLCD1P51178 756 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 ZNF75DP51815 510 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 PGGT1BP53609 377 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 TPD52P55327 224 aaPredicted RBP3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 LINC00205P59089 165 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 RELQ04864 619 aaPredicted RBP3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 ACTN3Q08043 901 aaPredicted RBP3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 DLG1Q12959 904 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 MYBPHQ13203 477 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 SLC39A14Q15043 492 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 UGCGQ16739 394 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 SLC39A12Q504Y0 691 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 GLRA4Q5JXX5 417 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 SPDYCQ5MJ68 293 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 SHEQ5VZ18 495 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 TXNRD3NBQ6F5E7 133 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 RHBDF2Q6PJF5 856 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 DET1Q7L5Y6 550 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 NUP54Q7Z3B4 507 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 RNF113BQ8IZP6 322 aaKnown RBP3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 ARHGAP24Q8N264 748 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 GBGT1Q8N5D6 347 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 UXS1Q8NBZ7 420 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 OR14A16Q8NHC5 309 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 B4GALNT2Q8NHY0 566 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 HEXDCQ8WVB3 486 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 DNAAF4Q8WXU2 420 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 FIG4Q92562 907 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 DNASE1L2Q92874 299 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 DAZLQ92904 295 aaKnown RBP3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 MIB2Q96AX9 1013 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 SNRNP40Q96DI7 357 aaKnown RBP3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 CABS1Q96KC9 395 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 RAD9AQ99638 391 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 RBM38Q9H0Z9 239 aaKnown RBP3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 TMEM206Q9H813 350 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 PELI2Q9HAT8 420 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 SERINC1Q9NRX5 453 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 PNPLA3Q9NST1 481 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 ZNF224Q9NZL3 707 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 MTRRQ9UBK8 725 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 SIX4Q9UIU6 781 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 MTUS1Q9ULD2 1270 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 SNX7Q9UNH6 387 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 IGLV5-37A0A075B6J1 123 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 ELOVL7A1L3X0 281 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 TRIM64A6NGJ6 449 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 CASTOR2A6NHX0 329 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 TRIM64BA6NI03 449 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 EIF3DO15371 548 aaKnown RBP eCLIP3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 ST8SIA3O43173 380 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 TSPAN1O60635 241 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 PRAF2O60831 178 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 KCNJ13O60928 360 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 SERPINI2O75830 405 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 PPP1R3DO95685 299 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 BAG2O95816 211 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 OLFM2O95897 454 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 HSP90AB1P08238 724 aaKnown RBP3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 ACP2P11117 423 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 EPCAMP16422 314 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 LBPP18428 481 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 WNT5AP41221 380 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 SLC9A3P48764 834 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 MAPK12P53778 367 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 B3GALT5-AS1P59052 145 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 ASIC1P78348 528 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 RPL24P83731 157 aaKnown RBP3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 KIF5AQ12840 1032 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 ILF3Q12906 894 aaKnown RBP eCLIP3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 CA9Q16790 459 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 HFEQ30201 348 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 FAM174BQ3ZCQ3 159 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 MDH1BQ5I0G3 518 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 MFSD12Q6NUT3 480 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 MOXD1Q6UVY6 613 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 CCNI2Q6ZMN8 369 aaPredicted RBP3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 ZNF704Q6ZNC4 412 aaPredicted RBP3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 PIM3Q86V86 326 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 PTOV1Q86YD1 416 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 TUSC5Q8IXB3 177 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 APCDD1Q8J025 514 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 CRYBG2Q8N1P7 616 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 L3MBTL4Q8NA19 623 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 MSANTD4Q8NCY6 345 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 OR13J1Q8NGT2 312 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 SEMA4DQ92854 862 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 PHF21AQ96BD5 680 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 PHF21BQ96EK2 531 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 ATP6V0BQ99437 205 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 FERMT1Q9BQL6 677 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 MMADHCQ9H3L0 296 aaPredicted RBP3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 DBNDD1Q9H9R9 158 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 CWC25Q9NXE8 425 aaPredicted RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms