RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 SCN4BQ8IWT1 228 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 FAM9CQ8IZT9 166 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 STK40Q8N2I9 435 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 SFRP1Q8N474 314 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 SPEM1Q8N4L4 309 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 FAM160A2Q8N612 972 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 TTC9BQ8N6N2 239 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 ATAD1Q8NBU5 361 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 DDHD1Q8NEL9 900 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 ZNF555Q8NEP9 628 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 OR52K2Q8NGK3 314 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 DNAJB8Q8NHS0 232 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 BLOC1S5Q8TDH9 187 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 RNF166Q96A37 237 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 MOCOSQ96EN8 888 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 SLC39A13Q96H72 371 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 ATOH8Q96SQ7 321 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 ZNF382Q96SR6 550 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 SLC29A1Q99808 456 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 SH3GL1Q99961 368 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 C1orf50Q9BV19 199 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 UGT2B28Q9BY64 529 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 ING2Q9H160 280 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 ARRDC1-AS1Q9H2J1 176 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 POLR1BQ9H9Y6 1135 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 CXorf21Q9HAI6 301 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 IL1RL2Q9HB29 575 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 TMEM30AQ9NV96 361 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 FAIMQ9NVQ4 179 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 POLR3BQ9NW08 1133 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 SFMBT1Q9UHJ3 866 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 GNPTGQ9UJJ9 305 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 OAZ3Q9UMX2 235 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 PCDHB3Q9Y5E6 796 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 PCDHA9Q9Y5H5 950 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 TNPO3Q9Y5L0 923 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 SPTBN2O15020 2390 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 MYOCOSA0A1B0GUC4 107 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 UBA6A0AVT1 1052 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 CCDC162PA2VCL2 907 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 K7ESF4 209 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 EI24O14681 340 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 TNFRSF10BO14763 440 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 SLC30A4O14863 429 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 LDB2O43679 373 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 PRAMEF11O60813 436 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 VNN2O95498 520 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 PRAMEF12O95522 483 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 CPNE6O95741 557 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 PEX11BO96011 259 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 ANXA6P08133 673 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 MMP2P08253 660 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 JUNBP17275 347 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 MSH3P20585 1137 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 MAP4P27816 1152 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 CTHP32929 405 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 GALK1P51570 392 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 ALDH3A2P51648 485 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 SH3BP2P78314 561 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 CHRNB3Q05901 458 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 RING1Q06587 406 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 SLC10A7Q0GE19 358 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 PLD1Q13393 1074 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 SERINC3Q13530 473 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 DAG1Q14118 895 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 CRY1Q16526 586 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 CSRP2Q16527 193 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 SMU1Q2TAY7 513 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 ZNF829Q3KNS6 432 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 VPS26BQ4G0F5 336 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 ARHGAP15Q53QZ3 475 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 ZNF789Q5FWF6 425 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 XKR7Q5GH72 579 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 PIK3R6Q5UE93 754 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 ALG1LQ6GMV1 187 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 FRA10AC1Q70Z53 315 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 KDELC2Q7Z4H8 507 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 TFAP2DQ7Z6R9 452 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 SCD5Q86SK9 330 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 PIM3Q86V86 326 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 RETREG3Q86VR2 466 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 TMC8Q8IU68 726 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 EPHX4Q8IUS5 362 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 PHYKPLQ8IUZ5 450 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 SVOPLQ8N434 492 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 CARNMT1Q8N4J0 409 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 DPP10Q8N608 796 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 SMYD1Q8NB12 490 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 OR8J3Q8NGG0 315 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 OR10T2Q8NGX3 314 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 RAB2BQ8WUD1 216 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 ABTB1Q969K4 478 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 PTERQ96BW5 349 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 C12orf43Q96C57 262 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 CCDC115Q96NT0 180 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 LRRC3BQ96PB8 259 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 DOK1Q99704 481 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 SEMA3CQ99985 751 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 BCL7BQ9BQE9 202 aa8.48□□□□□ -1.05
CTNNA1-223ENST00000520520 SLC39A3Q9BRY0 314 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms