RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 RFPL2O75678 378 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 DDNO94850 711 aaPredicted RBP3.92□□□□□ -1.78
SQLE-204ENST00000520493 ZWINTO95229 277 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 OLFM2O95897 454 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 NMBRP28336 390 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 HSPA4P34932 840 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 CASP3P42574 277 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 MTHFRP42898 656 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 STX1BP61266 288 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 SNRPEP62304 92 aaKnown RBP3.92□□□□□ -1.78
SQLE-204ENST00000520493 BNC1Q01954 994 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 RBPJQ06330 500 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 C17orf67Q0P5P2 114 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 MYBPHQ13203 477 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 XKR9Q5GH70 373 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 FAM76BQ5HYJ3 339 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 FAM69BQ5VUD6 431 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 TMEM211Q6ICI0 200 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 RAB12Q6IQ22 244 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 MOXD1Q6UVY6 613 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 PPP1R21Q6ZMI0 780 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 NUP54Q7Z3B4 507 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 DSG4Q86SJ6 1040 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 EXOC3L1Q86VI1 746 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 TMEM173Q86WV6 379 aaPredicted RBP3.92□□□□□ -1.78
SQLE-204ENST00000520493 LMNTD2Q8IXW0 634 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 RFLNBQ8N5W9 214 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 TRIML1Q8N9V2 468 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 C9orf43Q8TAL5 461 aaPredicted RBP3.92□□□□□ -1.78
SQLE-204ENST00000520493 SPATA20Q8TB22 786 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 TBC1D16Q8TBP0 767 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 SLAMF9Q96A28 289 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 RHBDF1Q96CC6 855 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 ERLEC1Q96DZ1 483 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 PDLIM5Q96HC4 596 aaKnown RBP3.92□□□□□ -1.78
SQLE-204ENST00000520493 AK8Q96MA6 479 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 NAP1L5Q96NT1 182 aaPredicted RBP3.92□□□□□ -1.78
SQLE-204ENST00000520493 QRFPRQ96P65 431 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 INPP4AQ96PE3 977 aaPredicted RBP3.92□□□□□ -1.78
SQLE-204ENST00000520493 OR6C1Q96RD1 312 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 IL25Q9H293 177 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 GOLPH3LQ9H4A5 285 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 CNOT10Q9H9A5 744 aaKnown RBP3.92□□□□□ -1.78
SQLE-204ENST00000520493 MALT1Q9UDY8 824 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 LOXL2Q9Y4K0 774 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 PCDHAC2Q9Y5I4 1007 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 TCF20Q9UGU0 1960 aaKnown RBP3.92□□□□□ -1.78
SQLE-204ENST00000520493 SPAG9O60271 1321 aaKnown RBP3.92□□□□□ -1.78
SQLE-204ENST00000520493 SAA2-SAA4A0A096LPE2 208 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 J3QR06 171 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 CLIC2O15247 247 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 GRID2O43424 1007 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 PLPP2O43688 288 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 B3GALNT1O75752 331 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 CELF2O95319 508 aaKnown RBP3.91□□□□□ -1.78
SQLE-204ENST00000520493 GBAP04062 536 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 IGHV4-30-4P0DP06 118 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 EEF2P13639 858 aaKnown RBP3.91□□□□□ -1.78
SQLE-204ENST00000520493 PDGFRAP16234 1089 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 ADRA2CP18825 462 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 PTPN3P26045 913 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 CDH13P55290 713 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 PPP2R2BQ00005 443 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 PRKCZQ05513 592 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 RPA4Q13156 261 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 OASLQ15646 514 aaKnown RBP3.91□□□□□ -1.78
SQLE-204ENST00000520493 CALCRLQ16602 461 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 VWC2Q2TAL6 325 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 RAB6CQ53S08 254 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 DNAJC21Q5F1R6 531 aaKnown RBP3.91□□□□□ -1.78
SQLE-204ENST00000520493 KCNT1Q5JUK3 1230 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 C6orf163Q5TEZ5 329 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 KRT39Q6A163 491 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 TEX38Q6PEX7 206 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 C15orf39Q6ZRI6 1047 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 ABI3BPQ7Z7G0 1075 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 ZNF329Q86UD4 541 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 GPR180Q86V85 440 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 HOOK3Q86VS8 718 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 SYCP3Q8IZU3 236 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 FBXO39Q8N4B4 442 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 SLC5A8Q8N695 610 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 ARL6IP6Q8N6S5 226 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 GRAPLQ8TC17 118 aaPredicted RBP3.91□□□□□ -1.78
SQLE-204ENST00000520493 UTP15Q8TED0 518 aaKnown RBP3.91□□□□□ -1.78
SQLE-204ENST00000520493 ROBO4Q8WZ75 1007 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 BICD1Q96G01 975 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 SEPHS2Q99611 448 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 EPYCQ99645 322 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 RAB6CQ9H0N0 254 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 TCF7L2Q9NQB0 619 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 PRMT7Q9NVM4 692 aaPredicted RBP3.91□□□□□ -1.78
SQLE-204ENST00000520493 SLC24A2Q9UI40 661 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 GRIP1Q9Y3R0 1128 aa3.91□□□□□ -1.78
SQLE-204ENST00000520493 A0A1W2PP11 408 aa3.9□□□□□ -1.79
SQLE-204ENST00000520493 CCDC69A6NI79 296 aa3.9□□□□□ -1.79
SQLE-204ENST00000520493 C15orf62A8K5M9 175 aa3.9□□□□□ -1.79
SQLE-204ENST00000520493 SLC33A1O00400 549 aaPredicted RBP3.9□□□□□ -1.79
SQLE-204ENST00000520493 SOCS6O14544 535 aa3.9□□□□□ -1.79
SQLE-204ENST00000520493 PGRMC2O15173 223 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms