RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 CDKN2AIPNLQ96HQ2 116 aa14.71□□□□□ -0.05
CSMD1-207ENST00000520451 TRAPPC9Q96Q05 1148 aa14.71□□□□□ -0.05
CSMD1-207ENST00000520451 ALS2CR12Q96Q35 445 aa14.71□□□□□ -0.05
CSMD1-207ENST00000520451 NLNQ9BYT8 704 aa14.71□□□□□ -0.05
CSMD1-207ENST00000520451 SLC7A5P2Q9GIP4 190 aa14.71□□□□□ -0.05
CSMD1-207ENST00000520451 PCMTD2Q9NV79 361 aa14.71□□□□□ -0.05
CSMD1-207ENST00000520451 ACTR10Q9NZ32 417 aa14.71□□□□□ -0.05
CSMD1-207ENST00000520451 SMARCAL1Q9NZC9 954 aa14.71□□□□□ -0.05
CSMD1-207ENST00000520451 AMFRQ9UKV5 643 aa14.71□□□□□ -0.05
CSMD1-207ENST00000520451 TTLL8A6PVC2 850 aa14.7□□□□□ -0.06
CSMD1-207ENST00000520451 E7EQ34 232 aa14.7□□□□□ -0.06
CSMD1-207ENST00000520451 AP2A2O94973 939 aa14.7□□□□□ -0.06
CSMD1-207ENST00000520451 GSTM1P09488 218 aa14.7□□□□□ -0.06
CSMD1-207ENST00000520451 MSL3P1P0C860 447 aa14.7□□□□□ -0.06
CSMD1-207ENST00000520451 ITGA1P56199 1179 aa14.7□□□□□ -0.06
CSMD1-207ENST00000520451 GSTM4Q03013 218 aa14.7□□□□□ -0.06
CSMD1-207ENST00000520451 P3H1Q32P28 736 aa14.7□□□□□ -0.06
CSMD1-207ENST00000520451 PTCHD3Q3KNS1 767 aa14.7□□□□□ -0.06
CSMD1-207ENST00000520451 FAM198BQ6UWH4 519 aa14.7□□□□□ -0.06
CSMD1-207ENST00000520451 HOOK3Q86VS8 718 aa14.7□□□□□ -0.06
CSMD1-207ENST00000520451 ADGRF3Q8IZF5 1079 aa14.7□□□□□ -0.06
CSMD1-207ENST00000520451 TAB3Q8N5C8 712 aaPredicted RBP14.7□□□□□ -0.06
CSMD1-207ENST00000520451 ADAMTS17Q8TE56 1095 aa14.7□□□□□ -0.06
CSMD1-207ENST00000520451 STYXQ8WUJ0 223 aa14.7□□□□□ -0.06
CSMD1-207ENST00000520451 MRFAP1L1Q96HT8 127 aa14.7□□□□□ -0.06
CSMD1-207ENST00000520451 SERTAD3Q9UJW9 196 aa14.7□□□□□ -0.06
CSMD1-207ENST00000520451 TCFL5Q9UL49 500 aa14.7□□□□□ -0.06
CSMD1-207ENST00000520451 PACSIN2Q9UNF0 486 aaPredicted RBP14.7□□□□□ -0.06
CSMD1-207ENST00000520451 ICKQ9UPZ9 632 aa14.7□□□□□ -0.06
CSMD1-207ENST00000520451 PCDHGA9Q9Y5G4 932 aaKnown RBP14.7□□□□□ -0.06
CSMD1-207ENST00000520451 PSMD3O43242 534 aa14.69□□□□□ -0.06
CSMD1-207ENST00000520451 AP2A1O95782 977 aa14.69□□□□□ -0.06
CSMD1-207ENST00000520451 CAPN1P07384 714 aa14.69□□□□□ -0.06
CSMD1-207ENST00000520451 MSNP26038 577 aaKnown RBP14.69□□□□□ -0.06
CSMD1-207ENST00000520451 NSG1P42857 185 aa14.69□□□□□ -0.06
CSMD1-207ENST00000520451 GDF10P55107 478 aa14.69□□□□□ -0.06
CSMD1-207ENST00000520451 BRD3Q15059 726 aa14.69□□□□□ -0.06
CSMD1-207ENST00000520451 NADK2Q4G0N4 442 aa14.69□□□□□ -0.06
CSMD1-207ENST00000520451 SPESP1Q6UW49 350 aa14.69□□□□□ -0.06
CSMD1-207ENST00000520451 CDHR3Q6ZTQ4 885 aa14.69□□□□□ -0.06
CSMD1-207ENST00000520451 TRIM73Q86UV7 250 aa14.69□□□□□ -0.06
CSMD1-207ENST00000520451 EFCAB3Q8N7B9 438 aa14.69□□□□□ -0.06
CSMD1-207ENST00000520451 OR5AR1Q8NGP9 310 aa14.69□□□□□ -0.06
CSMD1-207ENST00000520451 ELMO1Q92556 727 aa14.69□□□□□ -0.06
CSMD1-207ENST00000520451 TMEM121Q9BTD3 319 aa14.69□□□□□ -0.06
CSMD1-207ENST00000520451 MLXIPLQ9NP71 852 aa14.69□□□□□ -0.06
CSMD1-207ENST00000520451 ASF1AQ9Y294 204 aa14.69□□□□□ -0.06
CSMD1-207ENST00000520451 R3HDM2Q9Y2K5 976 aaKnown RBP14.69□□□□□ -0.06
CSMD1-207ENST00000520451 PRSS21Q9Y6M0 314 aa14.69□□□□□ -0.06
CSMD1-207ENST00000520451 SPTBP11277 2137 aa14.69□□□□□ -0.06
CSMD1-207ENST00000520451 USP9XQ93008 2570 aaPredicted RBP14.68□□□□□ -0.06
CSMD1-207ENST00000520451 TNRC6AQ8NDV7 1962 aaKnown RBP14.68□□□□□ -0.06
CSMD1-207ENST00000520451 MROH6A6NGR9 719 aa14.68□□□□□ -0.06
CSMD1-207ENST00000520451 OR51F1A6NGY5 319 aa14.68□□□□□ -0.06
CSMD1-207ENST00000520451 MIF4GDA9UHW6 222 aaKnown RBP14.68□□□□□ -0.06
CSMD1-207ENST00000520451 C9J4A7 227 aa14.68□□□□□ -0.06
CSMD1-207ENST00000520451 QSOX1O00391 747 aa14.68□□□□□ -0.06
CSMD1-207ENST00000520451 LIN7AO14910 233 aaPredicted RBP14.68□□□□□ -0.06
CSMD1-207ENST00000520451 ZNF749O43361 778 aa14.68□□□□□ -0.06
CSMD1-207ENST00000520451 VPS4BO75351 444 aa14.68□□□□□ -0.06
CSMD1-207ENST00000520451 TMEM63AO94886 807 aa14.68□□□□□ -0.06
CSMD1-207ENST00000520451 FTCDO95954 541 aa14.68□□□□□ -0.06
CSMD1-207ENST00000520451 FTH1P02794 183 aa14.68□□□□□ -0.06
CSMD1-207ENST00000520451 KLF1Q13351 362 aaPredicted RBP14.68□□□□□ -0.06
CSMD1-207ENST00000520451 ITIH4Q14624 930 aa14.68□□□□□ -0.06
CSMD1-207ENST00000520451 NCF4Q15080 339 aa14.68□□□□□ -0.06
CSMD1-207ENST00000520451 SYTL3Q4VX76 610 aa14.68□□□□□ -0.06
CSMD1-207ENST00000520451 CCDC38Q502W7 563 aa14.68□□□□□ -0.06
CSMD1-207ENST00000520451 PAPD7Q5XG87 772 aaKnown RBP14.68□□□□□ -0.06
CSMD1-207ENST00000520451 GPR135Q8IZ08 494 aa14.68□□□□□ -0.06
CSMD1-207ENST00000520451 SYCE1Q8N0S2 351 aa14.68□□□□□ -0.06
CSMD1-207ENST00000520451 C19orf47Q8N9M1 422 aaKnown RBP14.68□□□□□ -0.06
CSMD1-207ENST00000520451 SLC35B2Q8TB61 432 aa14.68□□□□□ -0.06
CSMD1-207ENST00000520451 CPT1CQ8TCG5 803 aa14.68□□□□□ -0.06
CSMD1-207ENST00000520451 N4BP2L2Q92802 583 aaPredicted RBP14.68□□□□□ -0.06
CSMD1-207ENST00000520451 VPS4AQ9UN37 437 aa14.68□□□□□ -0.06
CSMD1-207ENST00000520451 ZNF451Q9Y4E5 1061 aa14.68□□□□□ -0.06
CSMD1-207ENST00000520451 USP9YO00507 2555 aaPredicted RBP14.68□□□□□ -0.06
CSMD1-207ENST00000520451 TCRBV7S2A1N4TA0A589 114 aa14.67□□□□□ -0.06
CSMD1-207ENST00000520451 CCDC162PA2VCL2 907 aa14.67□□□□□ -0.06
CSMD1-207ENST00000520451 ZNF185O15231 689 aa14.67□□□□□ -0.06
CSMD1-207ENST00000520451 HBQ1P09105 142 aa14.67□□□□□ -0.06
CSMD1-207ENST00000520451 GP1BBP13224 206 aa14.67□□□□□ -0.06
CSMD1-207ENST00000520451 UGT2B7P16662 529 aa14.67□□□□□ -0.06
CSMD1-207ENST00000520451 AGXTP21549 392 aa14.67□□□□□ -0.06
CSMD1-207ENST00000520451 FOXN2P32314 431 aa14.67□□□□□ -0.06
CSMD1-207ENST00000520451 SHMT2P34897 504 aa14.67□□□□□ -0.06
CSMD1-207ENST00000520451 UQCRFS1P47985 274 aa14.67□□□□□ -0.06
CSMD1-207ENST00000520451 ATP1A4Q13733 1029 aa14.67□□□□□ -0.06
CSMD1-207ENST00000520451 DEFB110Q30KQ9 67 aa14.67□□□□□ -0.06
CSMD1-207ENST00000520451 PACS1Q6VY07 963 aa14.67□□□□□ -0.06
CSMD1-207ENST00000520451 NAPRTQ6XQN6 538 aa14.67□□□□□ -0.06
CSMD1-207ENST00000520451 UNC5AQ6ZN44 842 aa14.67□□□□□ -0.06
CSMD1-207ENST00000520451 LINC00523Q86TU6 105 aa14.67□□□□□ -0.06
CSMD1-207ENST00000520451 ZBTB2Q8N680 514 aa14.67□□□□□ -0.06
CSMD1-207ENST00000520451 DNAAF3Q8N9W5 541 aa14.67□□□□□ -0.06
CSMD1-207ENST00000520451 OR52K1Q8NGK4 314 aa14.67□□□□□ -0.06
CSMD1-207ENST00000520451 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.67□□□□□ -0.06
CSMD1-207ENST00000520451 OR2A14Q96R47 310 aa14.67□□□□□ -0.06
CSMD1-207ENST00000520451 DPH2Q9BQC3 489 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms