RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 FMO5P49326 533 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 SUOXP51687 545 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 SIRPAP78324 504 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 RUNX1T1Q06455 604 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 CXCL9Q07325 125 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 UBE2V1Q13404 147 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 PCLAFQ15004 111 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 ZNF718Q3SXZ3 478 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 PDSS1Q5T2R2 415 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 GDPD4Q6W3E5 623 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 C9orf139Q6ZV77 190 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 ADGRA1Q86SQ6 560 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 ITPRIPQ8IWB1 547 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 CTAGE4Q8IX94 777 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 CNPY4Q8N129 248 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 ZNF397Q8NF99 534 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 SPATA20Q8TB22 786 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 SMPDL3BQ92485 455 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 SLC22A12Q96S37 553 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 SMC6Q96SB8 1091 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 DDOQ99489 341 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 MRPL1Q9BYD6 325 aaKnown RBP3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 LRRC4Q9HBW1 653 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 WSB2Q9NYS7 404 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 STK26Q9P289 416 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 MARCH4Q9P2E8 410 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 RSPH14Q9UHP6 348 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 LCMT1Q9UIC8 334 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 PLAGL1Q9UM63 463 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 ZNF148Q9UQR1 794 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 ZNF711Q9Y462 761 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 RIMS2Q9UQ26 1411 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 SPATA31D1Q6ZQQ2 1576 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 CDK12Q9NYV4 1490 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 RTL1A6NKG5 1358 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 RPAP1Q9BWH6 1393 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 RICTORQ6R327 1708 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 SSH2Q76I76 1423 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 OR2M5A3KFT3 312 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 TMEM178BH3BS89 294 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 BMPR1BO00238 502 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 CAPN9O14815 690 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 ENTPD3O75355 529 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 BEST1O76090 585 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 BMP10O95393 424 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 ADCY5O95622 1261 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 ATP1A1P05023 1023 aaKnown RBP3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 TPM3P06753 285 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 TPOP07202 933 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 CCDC172P0C7W6 258 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 CSF2RAP15509 400 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 ACTN2P35609 894 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 LMAN1P49257 510 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 STAT2P52630 851 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 DLX5P56178 289 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 RPL24P83731 157 aaKnown RBP3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 BAATQ14032 418 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 KRT33BQ14525 404 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 TWISTNBQ3B726 338 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 ASPRV1Q53RT3 343 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 CCNYL2Q5T2Q4 361 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 FAM171BQ6P995 826 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 PACS1Q6VY07 963 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 KCTD8Q6ZWB6 473 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 USP43Q70EL4 1123 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 INTS8Q75QN2 995 aaKnown RBP3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 DSG4Q86SJ6 1040 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 SLC9B2Q86UD5 537 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 NFE4Q86UQ8 179 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 KBTBD6Q86V97 674 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 GALNT13Q8IUC8 556 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 MCUQ8NE86 351 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 DMBX1Q8NFW5 382 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 OR13A1Q8NGR1 328 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 OR52I2Q8NH67 350 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 PRPF31Q8WWY3 499 aaKnown RBP3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 SLC22A18Q96BI1 424 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 LINGO1Q96FE5 620 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 SCRN2Q96FV2 425 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 COG3Q96JB2 828 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 HGH1Q9BTY7 390 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 POLR3CQ9BUI4 534 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 SPATC1LQ9H0A9 340 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 MMP27Q9H306 513 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 TSPY26PQ9H489 355 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 DENND2DQ9H6A0 471 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 CHMP1AQ9HD42 196 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 MED4Q9NPJ6 270 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 MRPL15Q9P015 296 aaKnown RBP3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 KLHL9Q9P2J3 617 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 MORF4L1Q9UBU8 362 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 ICAM5Q9UMF0 924 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 PCDHGB4Q9UN71 923 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 B3GALT5Q9Y2C3 310 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 PCDHGA5Q9Y5G8 931 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 TTC21BQ7Z4L5 1316 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 ZNF541Q9H0D2 1346 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 PREX1Q8TCU6 1659 aa3.14□□□□□ -1.91
HMGB1P41-201ENST00000520234 METP08581 1390 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 MSH6P52701 1360 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms