RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 SPATA13Q96N96 652 aa12.16□□□□□ -0.46
TRAPPC9-206ENST00000519482 FCRL4Q96PJ5 515 aa12.16□□□□□ -0.46
TRAPPC9-206ENST00000519482 CD180Q99467 661 aa12.16□□□□□ -0.46
TRAPPC9-206ENST00000519482 PDE7BQ9NP56 450 aa12.16□□□□□ -0.46
TRAPPC9-206ENST00000519482 IL17BQ9UHF5 180 aa12.16□□□□□ -0.46
TRAPPC9-206ENST00000519482 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 IGHV5-51A0A0C4DH38 117 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 DNALI1O14645 258 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 EIF3HO15372 352 aaKnown RBP eCLIP12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 KCNN4O15554 427 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 SPAG6O75602 509 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 KIAA0754O94854 1291 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 TTC4O95801 387 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 CCNYL3P0C7X3 344 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 RALBP11234 206 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 MTHFD1P11586 935 aaKnown RBP12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 ZNF28P17035 718 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 PSMB4P28070 264 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 DLSTP36957 453 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 HADHAP40939 763 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 XIAPP98170 497 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 NFKB2Q00653 900 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 ZNF844Q08AG5 666 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 MSLNQ13421 630 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 PLCL1Q15111 1095 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 IZUMO3Q5VZ72 239 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 KLHDC8BQ8IXV7 354 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 SIDT2Q8NBJ9 832 aaKnown RBP12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 GALNT6Q8NCL4 622 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 HEXDCQ8WVB3 486 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 APOBEC4Q8WW27 367 aaKnown RBP12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 ULK4Q96C45 1275 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 STAMBPL1Q96FJ0 436 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 INSM2Q96T92 566 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 PPCSQ9HAB8 311 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 ARNT2Q9HBZ2 717 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 IMP3Q9NV31 184 aaKnown RBP12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 FKBPLQ9UIM3 349 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 KCND3Q9UK17 655 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 PCDHB3Q9Y5E6 796 aa12.15□□□□□ -0.46
TRAPPC9-206ENST00000519482 OR5K3A6NET4 321 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 TLCD2A6NGC4 264 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 RIPK2O43353 540 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 RECKO95980 971 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 SLC35G4P0C7Q5 338 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 PRKAR1AP10644 381 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 F8A1P23610 371 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 PBLDP30039 288 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 ACY1Q03154 408 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 DMTNQ08495 405 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 SLC29A2Q14542 456 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 GPR33Q49SQ1 333 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 TTMPQ5BVD1 217 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 DET1Q7L5Y6 550 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 SNX20Q7Z614 316 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 OOSP2Q86WS3 158 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 CARFQ8N187 725 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 OR13C4Q8NGS5 318 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 DCUN1D1Q96GG9 259 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 C12orf66Q96MD2 445 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 SERPINB12Q96P63 405 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 MAP3K3Q99759 626 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 TBL1YQ9BQ87 522 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 APOL2Q9BQE5 337 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 WWP1Q9H0M0 922 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 HRASLS2Q9NWW9 162 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 LNPEPQ9UIQ6 1025 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 CRLS1Q9UJA2 301 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 CROTQ9UKG9 612 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 RARRES3Q9UL19 164 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 PADI1Q9ULC6 663 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 KCTD3Q9Y597 815 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 COLEC10Q9Y6Z7 277 aa12.14□□□□□ -0.47
TRAPPC9-206ENST00000519482 C17orf113A0A1B0GUU1 675 aa12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 CFAP99D6REC4 459 aa12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 PYCARD-AS1I3L0S3 204 aa12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 TP73O15350 636 aa12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 SGTAO43765 313 aa12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 ITGALP20701 1170 aa12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 NDUFS1P28331 727 aa12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 ATP5DP30049 168 aa12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 PRLHRP49683 370 aa12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 ARL4DP49703 201 aa12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 ZNF140P52738 457 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 PPP1CAP62136 330 aa12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 HSD11B2P80365 405 aa12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 GPS1Q13098 491 aa12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 TUBB3Q13509 450 aa12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 OLIG2Q13516 323 aa12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 SEPT6Q14141 434 aa12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 PARP6Q2NL67 630 aa12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 DEFB109BQ30KR1 87 aa12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 P3H1Q32P28 736 aa12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 KRT71Q3SY84 523 aa12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 CAPRIN2Q6IMN6 1127 aaKnown RBP12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 DENND5AQ6IQ26 1287 aa12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 C16orf46Q6P387 395 aa12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 ZNF771Q7L3S4 317 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 PPIL6Q8IXY8 311 aa12.13□□□□□ -0.47
TRAPPC9-206ENST00000519482 NXPE1Q8N323 547 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms