RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 LDB1Q86U70 411 aaPredicted RBP10.27□□□□□ -0.77
SPIDR-205ENST00000518060 TRIM73Q86UV7 250 aa10.27□□□□□ -0.77
SPIDR-205ENST00000518060 PTRH1Q86Y79 214 aaKnown RBP10.27□□□□□ -0.77
SPIDR-205ENST00000518060 D2HGDHQ8N465 521 aa10.27□□□□□ -0.77
SPIDR-205ENST00000518060 CFAP61Q8NHU2 1237 aa10.27□□□□□ -0.77
SPIDR-205ENST00000518060 GSDMBQ8TAX9 411 aa10.27□□□□□ -0.77
SPIDR-205ENST00000518060 SKA2Q8WVK7 121 aaPredicted RBP10.27□□□□□ -0.77
SPIDR-205ENST00000518060 APOBEC4Q8WW27 367 aaKnown RBP10.27□□□□□ -0.77
SPIDR-205ENST00000518060 CLIP3Q96DZ5 547 aa10.27□□□□□ -0.77
SPIDR-205ENST00000518060 ZNF778Q96MU6 729 aa10.27□□□□□ -0.77
SPIDR-205ENST00000518060 RANBP9Q96S59 729 aa10.27□□□□□ -0.77
SPIDR-205ENST00000518060 SLC25A18Q9H1K4 315 aa10.27□□□□□ -0.77
SPIDR-205ENST00000518060 ADNPQ9H2P0 1102 aa10.27□□□□□ -0.77
SPIDR-205ENST00000518060 LHX9Q9NQ69 397 aa10.27□□□□□ -0.77
SPIDR-205ENST00000518060 CASS4Q9NQ75 786 aa10.27□□□□□ -0.77
SPIDR-205ENST00000518060 ZNF71Q9NQZ8 489 aaPredicted RBP10.27□□□□□ -0.77
SPIDR-205ENST00000518060 CATSPERZQ9NTU4 200 aa10.27□□□□□ -0.77
SPIDR-205ENST00000518060 ACTR10Q9NZ32 417 aa10.27□□□□□ -0.77
SPIDR-205ENST00000518060 BFARQ9NZS9 450 aa10.27□□□□□ -0.77
SPIDR-205ENST00000518060 TTC7AQ9ULT0 858 aaPredicted RBP10.27□□□□□ -0.77
SPIDR-205ENST00000518060 PPP2R2CQ9Y2T4 447 aa10.27□□□□□ -0.77
SPIDR-205ENST00000518060 COL6A6A6NMZ7 2263 aa10.26□□□□□ -0.77
SPIDR-205ENST00000518060 KDM1AO60341 852 aa10.26□□□□□ -0.77
SPIDR-205ENST00000518060 KLK3P07288 261 aaPredicted RBP10.26□□□□□ -0.77
SPIDR-205ENST00000518060 ST6GAL1P15907 406 aa10.26□□□□□ -0.77
SPIDR-205ENST00000518060 PRDX3P30048 256 aaKnown RBP10.26□□□□□ -0.77
SPIDR-205ENST00000518060 SHMT2P34897 504 aa10.26□□□□□ -0.77
SPIDR-205ENST00000518060 RPS15P62841 145 aaKnown RBP10.26□□□□□ -0.77
SPIDR-205ENST00000518060 HSPA14Q0VDF9 509 aa10.26□□□□□ -0.77
SPIDR-205ENST00000518060 SEMA3AQ14563 771 aa10.26□□□□□ -0.77
SPIDR-205ENST00000518060 SIX1Q15475 284 aaPredicted RBP10.26□□□□□ -0.77
SPIDR-205ENST00000518060 PRAMEF17Q5VTA0 474 aa10.26□□□□□ -0.77
SPIDR-205ENST00000518060 FAM199XQ6PEV8 388 aaPredicted RBP10.26□□□□□ -0.77
SPIDR-205ENST00000518060 ATG14Q6ZNE5 492 aa10.26□□□□□ -0.77
SPIDR-205ENST00000518060 BPHLQ86WA6 291 aaPredicted RBP10.26□□□□□ -0.77
SPIDR-205ENST00000518060 CARFQ8N187 725 aa10.26□□□□□ -0.77
SPIDR-205ENST00000518060 OR8K5Q8NH50 307 aa10.26□□□□□ -0.77
SPIDR-205ENST00000518060 C9orf43Q8TAL5 461 aaPredicted RBP10.26□□□□□ -0.77
SPIDR-205ENST00000518060 RUFY1Q96T51 708 aa10.26□□□□□ -0.77
SPIDR-205ENST00000518060 ACTL8Q9H568 366 aa10.26□□□□□ -0.77
SPIDR-205ENST00000518060 TFB2MQ9H5Q4 396 aaKnown RBP10.26□□□□□ -0.77
SPIDR-205ENST00000518060 EIF2B3Q9NR50 452 aaKnown RBP10.26□□□□□ -0.77
SPIDR-205ENST00000518060 CHRAC1Q9NRG0 131 aa10.26□□□□□ -0.77
SPIDR-205ENST00000518060 C1GALT1Q9NS00 363 aa10.26□□□□□ -0.77
SPIDR-205ENST00000518060 KCND1Q9NSA2 647 aa10.26□□□□□ -0.77
SPIDR-205ENST00000518060 STARD5Q9NSY2 213 aa10.26□□□□□ -0.77
SPIDR-205ENST00000518060 SEMA5BQ9P283 1151 aa10.26□□□□□ -0.77
SPIDR-205ENST00000518060 CIDEBQ9UHD4 219 aa10.26□□□□□ -0.77
SPIDR-205ENST00000518060 TSR3Q9UJK0 312 aaKnown RBP10.26□□□□□ -0.77
SPIDR-205ENST00000518060 ICKQ9UPZ9 632 aa10.26□□□□□ -0.77
SPIDR-205ENST00000518060 MAN2B2Q9Y2E5 1009 aa10.26□□□□□ -0.77
SPIDR-205ENST00000518060 ZKSCAN5Q9Y2L8 839 aa10.26□□□□□ -0.77
SPIDR-205ENST00000518060 IQCF5A8MTL0 148 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 ISM1B1AKI9 464 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 C21orf140B9A014 251 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 CD3EAPO15446 510 aaKnown RBP10.25□□□□□ -0.77
SPIDR-205ENST00000518060 NDUFS3O75489 264 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 APOA4P06727 396 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 UGT2B7P16662 529 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 MGAT1P26572 445 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 RPS18P62269 152 aaKnown RBP10.25□□□□□ -0.77
SPIDR-205ENST00000518060 CCZ1BP86790 482 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 CCZ1P86791 482 aaPredicted RBP10.25□□□□□ -0.77
SPIDR-205ENST00000518060 PLOD1Q02809 727 aaPredicted RBP10.25□□□□□ -0.77
SPIDR-205ENST00000518060 ABRQ12979 859 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 DEFB110Q30KQ9 67 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 ZNF658BQ4V348 819 aaPredicted RBP10.25□□□□□ -0.77
SPIDR-205ENST00000518060 PCID2Q5JVF3 399 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 CASC4Q6P4E1 433 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 SPESP1Q6UW49 350 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 C4orf22Q6V702 233 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 ZNF534Q76KX8 674 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 TMEM135Q86UB9 458 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 TAX1BP1Q86VP1 789 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 TBC1D21Q8IYX1 336 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 KRT222Q8N1A0 295 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 C19orf47Q8N9M1 422 aaKnown RBP10.25□□□□□ -0.77
SPIDR-205ENST00000518060 OR1L3Q8NH93 324 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 LKAAEAR1Q8TD35 194 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 CPT1BQ92523 772 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 ZNF501Q96CX3 271 aaPredicted RBP10.25□□□□□ -0.77
SPIDR-205ENST00000518060 FCRL4Q96PJ5 515 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 IL22Q9GZX6 179 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 HOMER3Q9NSC5 361 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 MARCH4Q9P2E8 410 aaPredicted RBP10.25□□□□□ -0.77
SPIDR-205ENST00000518060 POLG2Q9UHN1 485 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 POLHQ9Y253 713 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 BTRCQ9Y297 605 aa10.25□□□□□ -0.77
SPIDR-205ENST00000518060 GOLGA6L3A6NEY3 463 aa10.24□□□□□ -0.77
SPIDR-205ENST00000518060 BHMG1C9JSJ3 638 aaPredicted RBP10.24□□□□□ -0.77
SPIDR-205ENST00000518060 E7EQ34 232 aa10.24□□□□□ -0.77
SPIDR-205ENST00000518060 AP3B1O00203 1094 aa10.24□□□□□ -0.77
SPIDR-205ENST00000518060 PRMT5O14744 637 aaPredicted RBP10.24□□□□□ -0.77
SPIDR-205ENST00000518060 CREG1O75629 220 aa10.24□□□□□ -0.77
SPIDR-205ENST00000518060 RPN2P04844 631 aa10.24□□□□□ -0.77
SPIDR-205ENST00000518060 CHRM5P08912 532 aaPredicted RBP10.24□□□□□ -0.77
SPIDR-205ENST00000518060 PSMA3P25788 255 aa10.24□□□□□ -0.77
SPIDR-205ENST00000518060 NMBRP28336 390 aa10.24□□□□□ -0.77
SPIDR-205ENST00000518060 CCR7P32248 378 aa10.24□□□□□ -0.77
SPIDR-205ENST00000518060 TTPAP49638 278 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms