RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 A0A0U1RQS6 177 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 LCHNA4D1U4 455 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 MATN4O95460 622 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 OGNP20774 298 aaKnown RBP13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 PRIM2P49643 509 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 TAF10Q12962 218 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 TTLL9Q3SXZ7 439 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 SPRED1Q7Z699 444 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 C11orf74Q86VG3 221 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 DCSTAMPQ9H295 470 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 TMEM161AQ9NX61 479 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 AGO1Q9UL18 857 aaKnown RBP13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 VPS4AQ9UN37 437 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 CPQQ9Y646 472 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 SLC1A7O00341 560 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 UGT2B11O75310 529 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 FDXRP22570 491 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 GSTM2P28161 218 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 PPP3CCP48454 512 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 HSPA14Q0VDF9 509 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 USP41Q3LFD5 358 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 ELMSAN1Q6PJG2 1045 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 ZNF605Q86T29 641 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 SYT12Q8IV01 421 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 OR9Q1Q8NGQ5 310 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 OR13F1Q8NGS4 319 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 OR52J3Q8NH60 311 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 NDNFQ8TB73 568 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 BTN2A3PQ96KV6 586 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 ARHGAP39Q9C0H5 1083 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 TUBB1Q9H4B7 451 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 TMEM30AQ9NV96 361 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 TMLHEQ9NVH6 421 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 SERPINB7O75635 380 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 PAPSS2O95340 614 aaPredicted RBP13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 FGF4P08620 206 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 S100A1P23297 94 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 CRHBPP24387 322 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 INO80DQ53TQ3 878 aaPredicted RBP13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 FAM171A1Q5VUB5 890 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 DOK6Q6PKX4 331 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 CHPT1Q8WUD6 406 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 DEPDC7Q96QD5 511 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 CIPCQ9C0C6 399 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 NSUN3Q9H649 340 aaKnown RBP13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 GJD2Q9UKL4 321 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 PRMT5O14744 637 aaPredicted RBP13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 EPN2O95208 641 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 CCDC159P0C7I6 412 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 VEGFBP49765 207 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 CDKN1CP49918 316 aaPredicted RBP13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 EMX2Q04743 252 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 BOP1Q14137 746 aaKnown RBP13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 RCAN2Q14206 197 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 MED22Q15528 200 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 GTDC1Q4AE62 458 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 DERL2Q9GZP9 239 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 TPK1Q9H3S4 243 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 PCDHA9Q9Y5H5 950 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 RAI2Q9Y5P3 530 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 DNAJC25-GNG10A0A024R161 153 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 CREG1O75629 220 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 CES5AQ6NT32 575 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 GALNT10Q86SR1 603 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 DENND1CQ8IV53 801 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 KRTCAP2Q8N6L1 136 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 GOLM1Q8NBJ4 401 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 VPS37AQ8NEZ2 397 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 SMIM14Q96QK8 99 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 ZNF232Q9UNY5 417 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 ACTL7AQ9Y615 435 aa13.64□□□□□ -0.23
TSPAN17-208ENST00000514705 FXYD1O00168 92 aa13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 OXSR1O95747 527 aaPredicted RBP13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 COX7A2P14406 83 aa13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 AZGP1P25311 298 aaKnown RBP13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 NUDT6P53370 316 aa13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 IL10RBQ08334 325 aa13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 KDELC1Q6UW63 502 aa13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 ARMC8Q8IUR7 673 aa13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 UHRF1Q96T88 793 aaPredicted RBP13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 TRIM39Q9HCM9 518 aa13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 OGDHLQ9ULD0 1010 aa13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 GNG14A0A1W2PPG7 69 aa13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 A0A1W2PQ67 120 aa13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 SLC25A14O95258 325 aaPredicted RBP13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 PGRP06401 933 aa13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 SOAT1P35610 550 aa13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 ANKRD34AQ69YU3 496 aa13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 CLDN19Q8N6F1 224 aa13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 C3orf58Q8NDZ4 430 aa13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 UBASH3BQ8TF42 649 aa13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 DMRTB1Q96MA1 342 aa13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 SMOC2Q9H3U7 446 aa13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 SPASTQ9UBP0 616 aa13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 SARDHQ9UL12 918 aa13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 Q9Y3F1 56 aa13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 PCDHGA4Q9Y5G9 962 aa13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 CHRNA1P02708 482 aa13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 MT-ND2P03891 347 aa13.63□□□□□ -0.23
TSPAN17-208ENST00000514705 HTR1BP28222 390 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms