RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 KLHDC9Q8NEP7 349 aa4.78□□□□□ -1.64
HMGCS1-207ENST00000514610 OR2T12Q8NG77 320 aa4.78□□□□□ -1.64
HMGCS1-207ENST00000514610 OR13J1Q8NGT2 312 aa4.78□□□□□ -1.64
HMGCS1-207ENST00000514610 SLAMF9Q96A28 289 aa4.78□□□□□ -1.64
HMGCS1-207ENST00000514610 UPF2Q9HAU5 1272 aaKnown RBP4.78□□□□□ -1.64
HMGCS1-207ENST00000514610 OLFML3Q9NRN5 406 aa4.78□□□□□ -1.64
HMGCS1-207ENST00000514610 DPP3Q9NY33 737 aa4.78□□□□□ -1.64
HMGCS1-207ENST00000514610 B3GAT1Q9P2W7 334 aa4.78□□□□□ -1.64
HMGCS1-207ENST00000514610 LRWD1Q9UFC0 647 aa4.78□□□□□ -1.64
HMGCS1-207ENST00000514610 MTUS1Q9ULD2 1270 aa4.78□□□□□ -1.64
HMGCS1-207ENST00000514610 JRKLQ9Y4A0 524 aa4.78□□□□□ -1.64
HMGCS1-207ENST00000514610 A0A1W2PPQ1 181 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 EME2A4GXA9 379 aaPredicted RBP4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 PRSS44E7EML9 344 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 E9PI62 339 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 P2RY10O00398 339 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 ITGB6P18564 788 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 PTPN3P26045 913 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 MTHFRP42898 656 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 SLC9A3P48764 834 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 RAB28P51157 221 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 RPS18P62269 152 aaKnown RBP4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 CX3CL1P78423 397 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 PTPRCAPQ14761 206 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 ARMC4Q5T2S8 1044 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 CORO6Q6QEF8 472 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 C19orf48Q6RUI8 117 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 COMMD2Q86X83 199 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 PLD3Q8IV08 490 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 FOXP4Q8IVH2 680 aaPredicted RBP4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 ZNF843Q8N446 348 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 MRPS27Q92552 414 aaKnown RBP4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 HDAC11Q96DB2 347 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 SLC47A1Q96FL8 570 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 SGK494Q96LW2 274 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 PSD2Q9BQI7 771 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 NAA11Q9BSU3 229 aaPredicted RBP4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 TRAF4Q9BUZ4 470 aaPredicted RBP4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 NUP85Q9BW27 656 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 MMP28Q9H239 520 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 ERVMER34-1Q9H9K5 563 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 PIH1D3Q9NQM4 214 aaKnown RBP4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 ACAD8Q9UKU7 415 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 RNF150Q9ULK6 438 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 ABT1Q9ULW3 272 aaKnown RBP4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 PADI2Q9Y2J8 665 aa4.77□□□□□ -1.65
HMGCS1-207ENST00000514610 A0A1W2PRB8 838 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 TSPY2A6NKD2 308 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 OR6C76A6NM76 312 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 GAPDHSO14556 408 aaPredicted RBP4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 LMX1BO60663 402 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 TSHBP01222 138 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 IGLV2-11P01706 119 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 NR3C1P04150 777 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 RAB40ALP0C0E4 278 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 OR52Z1P0C646 297 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 TSPY3P0CV98 308 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 TSPY8P0CW00 308 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 ACHEP22303 614 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 AZGP1P25311 298 aaKnown RBP4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 EPHA2P29317 976 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 PCGF2P35227 344 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 ZNF41P51814 821 aaPredicted RBP4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 ZNF75DP51815 510 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 B3GALT5-AS1P59052 145 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 TSPY1Q01534 308 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 ACSM1Q08AH1 577 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 DMP1Q13316 513 aaPredicted RBP4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 COG2Q14746 738 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 ACCSLQ4AC99 568 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 TECRLQ5HYJ1 363 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 NR2C2APQ86WQ0 139 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 SLC4A11Q8NBS3 891 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 GRHL3Q8TE85 626 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 ZNF354BQ96LW1 612 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 FER1L6-AS2Q96M78 137 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 SFXN2Q96NB2 322 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 NODALQ96S42 347 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 MYADMQ96S97 322 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 SEPHS2Q99611 448 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 ZBTB20Q9HC78 741 aaPredicted RBP4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 SDF2L1Q9HCN8 221 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 A4GALTQ9NPC4 353 aa4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 ZNF701Q9NV72 531 aaPredicted RBP4.76□□□□□ -1.65
HMGCS1-207ENST00000514610 PCDH11YQ9BZA8 1340 aa4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 FGF17O60258 216 aa4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 ZNF500O60304 480 aaPredicted RBP4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 SMIM18P0DKX4 95 aa4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 FGF5P12034 268 aa4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 CCR10P46092 362 aa4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 NR2C2P49116 596 aa4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 LINC01547P58512 204 aaPredicted RBP4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 MAT1AQ00266 395 aaKnown RBP4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 RBPJQ06330 500 aa4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 PHLDA2Q53GA4 152 aa4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 WDR38Q5JTN6 314 aa4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 STPG1Q5TH74 334 aa4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 PRR27Q6MZM9 219 aa4.75□□□□□ -1.65
HMGCS1-207ENST00000514610 MEX3BQ6ZN04 569 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms