RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 SRMSQ9H3Y6 488 aa13.58□□□□□ -0.24
USP46-209ENST00000514536 XKR8Q9H6D3 395 aa13.58□□□□□ -0.24
USP46-209ENST00000514536 ZDHHC18Q9NUE0 388 aa13.58□□□□□ -0.24
USP46-209ENST00000514536 HRASLS2Q9NWW9 162 aa13.58□□□□□ -0.24
USP46-209ENST00000514536 AKAP7Q9P0M2 348 aaPredicted RBP13.58□□□□□ -0.24
USP46-209ENST00000514536 TSR3Q9UJK0 312 aaKnown RBP13.58□□□□□ -0.24
USP46-209ENST00000514536 TDRKHQ9Y2W6 561 aaKnown RBP13.58□□□□□ -0.24
USP46-209ENST00000514536 MED16Q9Y2X0 877 aa13.58□□□□□ -0.24
USP46-209ENST00000514536 LOXL2Q9Y4K0 774 aa13.58□□□□□ -0.24
USP46-209ENST00000514536 COMMD10Q9Y6G5 202 aa13.58□□□□□ -0.24
USP46-209ENST00000514536 COL27A1Q8IZC6 1860 aaPredicted RBP13.57□□□□□ -0.24
USP46-209ENST00000514536 PLD2O14939 933 aa13.57□□□□□ -0.24
USP46-209ENST00000514536 C9P02748 559 aa13.57□□□□□ -0.24
USP46-209ENST00000514536 CAPNS1P04632 268 aa13.57□□□□□ -0.24
USP46-209ENST00000514536 MAGEA4P43358 317 aa13.57□□□□□ -0.24
USP46-209ENST00000514536 CLCN7P51798 805 aa13.57□□□□□ -0.24
USP46-209ENST00000514536 EIF3IQ13347 325 aaKnown RBP13.57□□□□□ -0.24
USP46-209ENST00000514536 ACSBG2Q5FVE4 666 aa13.57□□□□□ -0.24
USP46-209ENST00000514536 FAM92BQ6ZTR7 304 aa13.57□□□□□ -0.24
USP46-209ENST00000514536 C3orf62Q6ZUJ4 267 aa13.57□□□□□ -0.24
USP46-209ENST00000514536 ARHGAP22Q7Z5H3 698 aa13.57□□□□□ -0.24
USP46-209ENST00000514536 SIDT2Q8NBJ9 832 aaKnown RBP13.57□□□□□ -0.24
USP46-209ENST00000514536 OR5K2Q8NHB8 316 aa13.57□□□□□ -0.24
USP46-209ENST00000514536 KCNJ9Q92806 393 aa13.57□□□□□ -0.24
USP46-209ENST00000514536 ZDHHC12Q96GR4 267 aa13.57□□□□□ -0.24
USP46-209ENST00000514536 SLC46A1Q96NT5 459 aa13.57□□□□□ -0.24
USP46-209ENST00000514536 NDNQ99608 321 aa13.57□□□□□ -0.24
USP46-209ENST00000514536 SLC30A3Q99726 388 aa13.57□□□□□ -0.24
USP46-209ENST00000514536 TFB2MQ9H5Q4 396 aaKnown RBP13.57□□□□□ -0.24
USP46-209ENST00000514536 ZFATQ9P243 1243 aa13.57□□□□□ -0.24
USP46-209ENST00000514536 EPHA6Q9UF33 1036 aa13.57□□□□□ -0.24
USP46-209ENST00000514536 PISDQ9UG56 409 aa13.57□□□□□ -0.24
USP46-209ENST00000514536 MN1Q10571 1320 aaPredicted RBP13.56□□□□□ -0.24
USP46-209ENST00000514536 OR5K3A6NET4 321 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 HGSO14964 777 aaPredicted RBP13.56□□□□□ -0.24
USP46-209ENST00000514536 KIF1CO43896 1103 aaKnown RBP13.56□□□□□ -0.24
USP46-209ENST00000514536 PIAS1O75925 651 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 TNFSF15O95150 251 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 JMJD7P0C870 316 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 TPBGLP0DKB5 382 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 CCL4P13236 92 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 POLR2CP19387 275 aaPredicted RBP13.56□□□□□ -0.24
USP46-209ENST00000514536 ITIH1P19827 911 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 RBMS1P29558 406 aaKnown RBP13.56□□□□□ -0.24
USP46-209ENST00000514536 CSTF2P33240 577 aaKnown RBP eCLIP13.56□□□□□ -0.24
USP46-209ENST00000514536 GPX6P59796 221 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 PPP1CAP62136 330 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 GBX1Q14549 363 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 DNTTIP2Q5QJE6 756 aaKnown RBP13.56□□□□□ -0.24
USP46-209ENST00000514536 RBM20Q5T481 1227 aaKnown RBP13.56□□□□□ -0.24
USP46-209ENST00000514536 ARMC6Q6NXE6 501 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 GALNT7Q86SF2 657 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 OOSP2Q86WS3 158 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 LSMEM2Q8N112 164 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 AGBL5Q8NDL9 886 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 GPR21Q99679 349 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 PHACTR1Q9C0D0 580 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 RAB33BQ9H082 229 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 POLG2Q9UHN1 485 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 ZMIZ1Q9ULJ6 1067 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 PLAGL1Q9UM63 463 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 RUVBL2Q9Y230 463 aaKnown RBP13.56□□□□□ -0.24
USP46-209ENST00000514536 DHRS7Q9Y394 339 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 PCDHGA8Q9Y5G5 932 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 PSAT1Q9Y617 370 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 NFS1Q9Y697 457 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 CHD6Q8TD26 2715 aa13.56□□□□□ -0.24
USP46-209ENST00000514536 AKAP13Q12802 2813 aa13.55□□□□□ -0.24
USP46-209ENST00000514536 BTN3A3O00478 584 aa13.55□□□□□ -0.24
USP46-209ENST00000514536 ZZEF1O43149 2961 aa13.55□□□□□ -0.24
USP46-209ENST00000514536 VPS26AO75436 327 aa13.55□□□□□ -0.24
USP46-209ENST00000514536 RASSF9O75901 435 aa13.55□□□□□ -0.24
USP46-209ENST00000514536 ETV5P41161 510 aa13.55□□□□□ -0.24
USP46-209ENST00000514536 SEPHS1P49903 392 aa13.55□□□□□ -0.24
USP46-209ENST00000514536 MAPK10P53779 464 aa13.55□□□□□ -0.24
USP46-209ENST00000514536 CUL1Q13616 776 aa13.55□□□□□ -0.24
USP46-209ENST00000514536 KLHL38Q2WGJ6 581 aa13.55□□□□□ -0.24
USP46-209ENST00000514536 CACHD1Q5VU97 1274 aa13.55□□□□□ -0.24
USP46-209ENST00000514536 UNC5DQ6UXZ4 953 aa13.55□□□□□ -0.24
USP46-209ENST00000514536 STRA8Q7Z7C7 330 aa13.55□□□□□ -0.24
USP46-209ENST00000514536 AMIGO1Q86WK6 493 aa13.55□□□□□ -0.24
USP46-209ENST00000514536 LRRN4CLQ8ND94 238 aa13.55□□□□□ -0.24
USP46-209ENST00000514536 GIMAP7Q8NHV1 300 aa13.55□□□□□ -0.24
USP46-209ENST00000514536 ZCCHC14Q8WYQ9 949 aaKnown RBP13.55□□□□□ -0.24
USP46-209ENST00000514536 INPP5DQ92835 1189 aa13.55□□□□□ -0.24
USP46-209ENST00000514536 LRRC4CQ9HCJ2 640 aa13.55□□□□□ -0.24
USP46-209ENST00000514536 SMYD2Q9NRG4 433 aa13.55□□□□□ -0.24
USP46-209ENST00000514536 OCIAD1Q9NX40 245 aa13.55□□□□□ -0.24
USP46-209ENST00000514536 KLHL42Q9P2K6 505 aa13.55□□□□□ -0.24
USP46-209ENST00000514536 DKK4Q9UBT3 224 aa13.55□□□□□ -0.24
USP46-209ENST00000514536 MTRF1LQ9UGC7 380 aaKnown RBP13.55□□□□□ -0.24
USP46-209ENST00000514536 CIDEBQ9UHD4 219 aa13.55□□□□□ -0.24
USP46-209ENST00000514536 ICKQ9UPZ9 632 aa13.55□□□□□ -0.24
USP46-209ENST00000514536 TMEM8BA6NDV4 472 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 EFCAB7A8K855 629 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 TAF4O00268 1085 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 BTN3A1O00481 513 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 ZNF500O60304 480 aaPredicted RBP13.54□□□□□ -0.24
USP46-209ENST00000514536 DXOO77932 396 aaKnown RBP13.54□□□□□ -0.24
USP46-209ENST00000514536 GSTA2P09210 222 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms