RNA–Protein interactions for RNA: ENST00000514528.5

MATR3-225, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-225ENST00000514528 HNRNPRO43390 633 aaKnown RBP16.34■□□□□ 0.21
MATR3-225ENST00000514528 LDB2O43679 373 aa16.34■□□□□ 0.21
MATR3-225ENST00000514528 CD63P08962 238 aa16.34■□□□□ 0.21
MATR3-225ENST00000514528 ADRA1AP35348 466 aa16.34■□□□□ 0.21
MATR3-225ENST00000514528 ELOAQ14241 798 aaKnown RBP16.34■□□□□ 0.21
MATR3-225ENST00000514528 ZRSR2Q15696 482 aaKnown RBP16.34■□□□□ 0.21
MATR3-225ENST00000514528 SARM1Q6SZW1 724 aa16.34■□□□□ 0.21
MATR3-225ENST00000514528 SPESP1Q6UW49 350 aa16.34■□□□□ 0.21
MATR3-225ENST00000514528 RANBP10Q6VN20 620 aa16.34■□□□□ 0.21
MATR3-225ENST00000514528 AMIGO1Q86WK6 493 aa16.34■□□□□ 0.21
MATR3-225ENST00000514528 SRRM1Q8IYB3 904 aaKnown RBP16.34■□□□□ 0.21
MATR3-225ENST00000514528 NXPE1Q8N323 547 aa16.34■□□□□ 0.21
MATR3-225ENST00000514528 ZADH2Q8N4Q0 377 aa16.34■□□□□ 0.21
MATR3-225ENST00000514528 C19orf47Q8N9M1 422 aaKnown RBP16.34■□□□□ 0.21
MATR3-225ENST00000514528 OR4K2Q8NGD2 314 aa16.34■□□□□ 0.21
MATR3-225ENST00000514528 PPP4R1Q8TF05 950 aa16.34■□□□□ 0.21
MATR3-225ENST00000514528 PTERQ96BW5 349 aa16.34■□□□□ 0.21
MATR3-225ENST00000514528 GBP4Q96PP9 640 aa16.34■□□□□ 0.21
MATR3-225ENST00000514528 WDR77Q9BQA1 342 aaPredicted RBP16.34■□□□□ 0.21
MATR3-225ENST00000514528 KLHL25Q9H0H3 589 aa16.34■□□□□ 0.21
MATR3-225ENST00000514528 SLC22A11Q9NSA0 550 aa16.34■□□□□ 0.21
MATR3-225ENST00000514528 IGSF5Q9NSI5 407 aa16.34■□□□□ 0.21
MATR3-225ENST00000514528 DDX56Q9NY93 547 aaKnown RBP16.34■□□□□ 0.21
MATR3-225ENST00000514528 ACTR10Q9NZ32 417 aa16.34■□□□□ 0.21
MATR3-225ENST00000514528 C5orf60A6NFR6 353 aa16.33■□□□□ 0.2
MATR3-225ENST00000514528 PEX12O00623 359 aa16.33■□□□□ 0.2
MATR3-225ENST00000514528 ONECUT2O95948 504 aa16.33■□□□□ 0.2
MATR3-225ENST00000514528 AGTP01019 485 aa16.33■□□□□ 0.2
MATR3-225ENST00000514528 CTSBP07858 339 aa16.33■□□□□ 0.2
MATR3-225ENST00000514528 FOLR3P41439 243 aa16.33■□□□□ 0.2
MATR3-225ENST00000514528 TSFMP43897 325 aaKnown RBP16.33■□□□□ 0.2
MATR3-225ENST00000514528 FOXL2P58012 376 aa16.33■□□□□ 0.2
MATR3-225ENST00000514528 DCDP81605 110 aaKnown RBP16.33■□□□□ 0.2
MATR3-225ENST00000514528 RPA4Q13156 261 aa16.33■□□□□ 0.2
MATR3-225ENST00000514528 TFDP2Q14188 446 aa16.33■□□□□ 0.2
MATR3-225ENST00000514528 KRT33BQ14525 404 aa16.33■□□□□ 0.2
MATR3-225ENST00000514528 TCEAL1Q15170 157 aa16.33■□□□□ 0.2
MATR3-225ENST00000514528 MLIPQ5VWP3 458 aa16.33■□□□□ 0.2
MATR3-225ENST00000514528 GPR135Q8IZ08 494 aa16.33■□□□□ 0.2
MATR3-225ENST00000514528 QKIQ96PU8 341 aaKnown RBP eCLIP16.33■□□□□ 0.23e-18■■■■■ 85.5
MATR3-225ENST00000514528 FERD3LQ96RJ6 166 aa16.33■□□□□ 0.2
MATR3-225ENST00000514528 AP1M1Q9BXS5 423 aa16.33■□□□□ 0.2
MATR3-225ENST00000514528 SPRTNQ9H040 489 aaPredicted RBP16.33■□□□□ 0.2
MATR3-225ENST00000514528 ATP13A2Q9NQ11 1180 aa16.33■□□□□ 0.2
MATR3-225ENST00000514528 AGPAT4Q9NRZ5 378 aa16.33■□□□□ 0.2
MATR3-225ENST00000514528 KLHL8Q9P2G9 620 aaPredicted RBP16.33■□□□□ 0.2
MATR3-225ENST00000514528 TRHDEQ9UKU6 1024 aa16.33■□□□□ 0.2
MATR3-225ENST00000514528 NOVA2Q9UNW9 492 aaKnown RBP16.33■□□□□ 0.2
MATR3-225ENST00000514528 ICKQ9UPZ9 632 aa16.33■□□□□ 0.2
MATR3-225ENST00000514528 CDYLQ9Y232 598 aa16.33■□□□□ 0.2
MATR3-225ENST00000514528 CELSR1Q9NYQ6 3014 aa16.33■□□□□ 0.2
MATR3-225ENST00000514528 FER1L5A0AVI2 2057 aa16.33■□□□□ 0.2
MATR3-225ENST00000514528 TRBV5-4A0A0C4DH59 114 aa16.32■□□□□ 0.2
MATR3-225ENST00000514528 CCDC66A2RUB6 948 aa16.32■□□□□ 0.2
MATR3-225ENST00000514528 C2orf81A6NN90 581 aa16.32■□□□□ 0.2
MATR3-225ENST00000514528 AGPSO00116 658 aa16.32■□□□□ 0.2
MATR3-225ENST00000514528 LRRTM2O43300 516 aa16.32■□□□□ 0.2
MATR3-225ENST00000514528 MAP3K7O43318 606 aa16.32■□□□□ 0.2
MATR3-225ENST00000514528 CST8O60676 142 aa16.32■□□□□ 0.2
MATR3-225ENST00000514528 OR2B3O76000 313 aa16.32■□□□□ 0.2
MATR3-225ENST00000514528 ATP1B2P14415 290 aaPredicted RBP16.32■□□□□ 0.2
MATR3-225ENST00000514528 ITGAXP20702 1163 aa16.32■□□□□ 0.2
MATR3-225ENST00000514528 PDHA2P29803 388 aa16.32■□□□□ 0.2
MATR3-225ENST00000514528 SLC1A1P43005 524 aa16.32■□□□□ 0.2
MATR3-225ENST00000514528 TNNT3P45378 269 aaPredicted RBP16.32■□□□□ 0.2
MATR3-225ENST00000514528 ZNF140P52738 457 aaPredicted RBP16.32■□□□□ 0.2
MATR3-225ENST00000514528 AIMP2Q13155 320 aaKnown RBP16.32■□□□□ 0.2
MATR3-225ENST00000514528 NKAIN1Q4KMZ8 207 aa16.32■□□□□ 0.2
MATR3-225ENST00000514528 CROCCQ5TZA2 2017 aa16.32■□□□□ 0.2
MATR3-225ENST00000514528 PID1Q7Z2X4 250 aa16.32■□□□□ 0.2
MATR3-225ENST00000514528 PHC3Q8NDX5 983 aa16.32■□□□□ 0.2
MATR3-225ENST00000514528 HEXDCQ8WVB3 486 aa16.32■□□□□ 0.2
MATR3-225ENST00000514528 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.32■□□□□ 0.28e-11■■■□□ 17.9
MATR3-225ENST00000514528 MARVELD3Q96A59 401 aa16.32■□□□□ 0.2
MATR3-225ENST00000514528 ULK4Q96C45 1275 aa16.32■□□□□ 0.2
MATR3-225ENST00000514528 RBM41Q96IZ5 413 aaKnown RBP16.32■□□□□ 0.2
MATR3-225ENST00000514528 OR2A14Q96R47 310 aa16.32■□□□□ 0.2
MATR3-225ENST00000514528 DNAJC7Q99615 494 aa16.32■□□□□ 0.2
MATR3-225ENST00000514528 SLC7A5P2Q9GIP4 190 aa16.32■□□□□ 0.2
MATR3-225ENST00000514528 XKR8Q9H6D3 395 aa16.32■□□□□ 0.2
MATR3-225ENST00000514528 ENAMQ9NRM1 1142 aa16.32■□□□□ 0.2
MATR3-225ENST00000514528 ZSCAN9O15535 394 aaPredicted RBP16.31■□□□□ 0.2
MATR3-225ENST00000514528 STSP08842 583 aa16.31■□□□□ 0.2
MATR3-225ENST00000514528 TPBGLP0DKB5 382 aa16.31■□□□□ 0.2
MATR3-225ENST00000514528 RALBP11234 206 aa16.31■□□□□ 0.2
MATR3-225ENST00000514528 EDN3P14138 238 aa16.31■□□□□ 0.2
MATR3-225ENST00000514528 UGT2B7P16662 529 aa16.31■□□□□ 0.2
MATR3-225ENST00000514528 GLRBP48167 497 aa16.31■□□□□ 0.2
MATR3-225ENST00000514528 UBASH3AP57075 661 aa16.31■□□□□ 0.2
MATR3-225ENST00000514528 C1orf189Q5VU69 101 aa16.31■□□□□ 0.2
MATR3-225ENST00000514528 B3GNTL1Q67FW5 361 aaPredicted RBP16.31■□□□□ 0.2
MATR3-225ENST00000514528 RHOT2Q8IXI1 618 aa16.31■□□□□ 0.2
MATR3-225ENST00000514528 DNAJC22Q8N4W6 341 aa16.31■□□□□ 0.2
MATR3-225ENST00000514528 COG1Q8WTW3 980 aa16.31■□□□□ 0.2
MATR3-225ENST00000514528 TFGQ92734 400 aaPredicted RBP16.31■□□□□ 0.2
MATR3-225ENST00000514528 DCUN1D1Q96GG9 259 aa16.31■□□□□ 0.2
MATR3-225ENST00000514528 COPS8Q99627 209 aa16.31■□□□□ 0.2
MATR3-225ENST00000514528 SLX1AQ9BQ83 275 aa16.31■□□□□ 0.2
MATR3-225ENST00000514528 FSD1LQ9BXM9 530 aa16.31■□□□□ 0.2
MATR3-225ENST00000514528 GBA3Q9H227 469 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms