RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 POU4F1Q01851 419 aa19.7■□□□□ 0.74
USP53-208ENST00000514305 BOP1Q14137 746 aaKnown RBP19.7■□□□□ 0.74
USP53-208ENST00000514305 KIR2DS5Q14953 304 aa19.7■□□□□ 0.74
USP53-208ENST00000514305 UAP1Q16222 522 aaPredicted RBP19.7■□□□□ 0.74
USP53-208ENST00000514305 ZNF789Q5FWF6 425 aa19.7■□□□□ 0.74
USP53-208ENST00000514305 IGF2-ASQ6U949 168 aa19.7■□□□□ 0.74
USP53-208ENST00000514305 ZC3HC1Q86WB0 502 aaKnown RBP19.7■□□□□ 0.74
USP53-208ENST00000514305 INPP5DQ92835 1189 aa19.7■□□□□ 0.74
USP53-208ENST00000514305 ELMO2Q96JJ3 720 aa19.7■□□□□ 0.74
USP53-208ENST00000514305 FOPNLQ96NB1 174 aa19.7■□□□□ 0.74
USP53-208ENST00000514305 COG4Q9H9E3 785 aa19.7■□□□□ 0.74
USP53-208ENST00000514305 SARS2Q9NP81 518 aaKnown RBP19.7■□□□□ 0.74
USP53-208ENST00000514305 ASCL3Q9NQ33 180 aa19.7■□□□□ 0.74
USP53-208ENST00000514305 SLC23A2Q9UGH3 650 aa19.7■□□□□ 0.74
USP53-208ENST00000514305 SLC24A2Q9UI40 661 aa19.7■□□□□ 0.74
USP53-208ENST00000514305 CXorf49A8MYA2 514 aaPredicted RBP19.69■□□□□ 0.74
USP53-208ENST00000514305 POC1B-GALNT4F8VUJ3 575 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 EIF3FO00303 357 aaPredicted RBP19.69■□□□□ 0.74
USP53-208ENST00000514305 ATXN7O15265 892 aaPredicted RBP19.69■□□□□ 0.74
USP53-208ENST00000514305 KDM1AO60341 852 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 CBSLP0DN79 551 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 F3P13726 295 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 ENO3P13929 434 aaPredicted RBP19.69■□□□□ 0.74
USP53-208ENST00000514305 ITGB6P18564 788 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 AOAHP28039 575 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 NDUFS1P28331 727 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 CBSP35520 551 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 LIMK2P53671 638 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 IFFO1Q0D2I5 559 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 HSPA14Q0VDF9 509 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 NFE2L1Q14494 772 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 CTSL3PQ5NE16 218 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 HECTD2Q5U5R9 776 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 KCTD16Q68DU8 428 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 FOXR1Q6PIV2 292 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 OGFOD3Q6PK18 319 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 ABRAXAS1Q6UWZ7 409 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 CCDC91Q7Z6B0 441 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 SLC9B2Q86UD5 537 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 NRROSQ86YC3 692 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 ARL14Q8N4G2 192 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 MREGQ8N565 214 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 ZBTB2Q8N680 514 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 KYQ8NBH2 561 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 CCL4L1Q8NHW4 92 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 WDR36Q8NI36 951 aaKnown RBP19.69■□□□□ 0.74
USP53-208ENST00000514305 SLC44A1Q8WWI5 657 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 SH3KBP1Q96B97 665 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 DPH1Q9BZG8 443 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 SYTL2Q9HCH5 934 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 SMYD2Q9NRG4 433 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 ZNF180Q9UJW8 692 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 DHRS7Q9Y394 339 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 PCDHGA8Q9Y5G5 932 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 KIF26BQ2KJY2 2108 aa19.69■□□□□ 0.74
USP53-208ENST00000514305 FAM95CA0A1B0GW59 222 aa19.68■□□□□ 0.74
USP53-208ENST00000514305 KLK10O43240 276 aa19.68■□□□□ 0.74
USP53-208ENST00000514305 RPN2P04844 631 aa19.68■□□□□ 0.74
USP53-208ENST00000514305 GABRB3P28472 473 aa19.68■□□□□ 0.74
USP53-208ENST00000514305 ATP5DP30049 168 aa19.68■□□□□ 0.74
USP53-208ENST00000514305 CCR7P32248 378 aa19.68■□□□□ 0.74
USP53-208ENST00000514305 KRT33BQ14525 404 aa19.68■□□□□ 0.74
USP53-208ENST00000514305 USP10Q14694 798 aaKnown RBP19.68■□□□□ 0.74
USP53-208ENST00000514305 NAA30Q147X3 362 aaPredicted RBP19.68■□□□□ 0.74
USP53-208ENST00000514305 MICALCLQ6ZW33 695 aa19.68■□□□□ 0.74
USP53-208ENST00000514305 TRIM48Q8IWZ4 208 aa19.68■□□□□ 0.74
USP53-208ENST00000514305 RBM12BQ8IXT5 1001 aaKnown RBP19.68■□□□□ 0.74
USP53-208ENST00000514305 KRT222Q8N1A0 295 aa19.68■□□□□ 0.74
USP53-208ENST00000514305 LSM14AQ8ND56 463 aaKnown RBP19.68■□□□□ 0.74
USP53-208ENST00000514305 UHMK1Q8TAS1 419 aaKnown RBP19.68■□□□□ 0.74
USP53-208ENST00000514305 CCDC97Q96F63 343 aaPredicted RBP19.68■□□□□ 0.74
USP53-208ENST00000514305 SLC46A1Q96NT5 459 aa19.68■□□□□ 0.74
USP53-208ENST00000514305 PAFAH2Q99487 392 aa19.68■□□□□ 0.74
USP53-208ENST00000514305 POPDC3Q9HBV1 291 aa19.68■□□□□ 0.74
USP53-208ENST00000514305 FAM8A1Q9UBU6 413 aa19.68■□□□□ 0.74
USP53-208ENST00000514305 TBC1D29Q9UFV1 150 aa19.68■□□□□ 0.74
USP53-208ENST00000514305 PLEKHM1Q9Y4G2 1056 aa19.68■□□□□ 0.74
USP53-208ENST00000514305 PCYT1BQ9Y5K3 369 aaPredicted RBP19.68■□□□□ 0.74
USP53-208ENST00000514305 PSAT1Q9Y617 370 aa19.68■□□□□ 0.74
USP53-208ENST00000514305 COLEC10Q9Y6Z7 277 aa19.68■□□□□ 0.74
USP53-208ENST00000514305 CCDC187A0A096LP49 1063 aa19.67■□□□□ 0.74
USP53-208ENST00000514305 IQANK1A0A1B0GTG1 560 aa19.67■□□□□ 0.74
USP53-208ENST00000514305 SLC5A10A0PJK1 596 aa19.67■□□□□ 0.74
USP53-208ENST00000514305 IQCF5A8MTL0 148 aa19.67■□□□□ 0.74
USP53-208ENST00000514305 B4DGG1 531 aa19.67■□□□□ 0.74
USP53-208ENST00000514305 NIPSNAP2O75323 286 aa19.67■□□□□ 0.74
USP53-208ENST00000514305 HSD17B3P37058 310 aa19.67■□□□□ 0.74
USP53-208ENST00000514305 ZNF549Q6P9A3 640 aa19.67■□□□□ 0.74
USP53-208ENST00000514305 TTC23LQ6PF05 361 aa19.67■□□□□ 0.74
USP53-208ENST00000514305 IYDQ6PHW0 289 aa19.67■□□□□ 0.74
USP53-208ENST00000514305 CROCCP2Q86T23 111 aa19.67■□□□□ 0.74
USP53-208ENST00000514305 CCDC74AQ96AQ1 378 aa19.67■□□□□ 0.74
USP53-208ENST00000514305 CXorf40BQ96DE9 158 aa19.67■□□□□ 0.74
USP53-208ENST00000514305 MTBPQ96DY7 904 aa19.67■□□□□ 0.74
USP53-208ENST00000514305 MRRFQ96E11 262 aaKnown RBP19.67■□□□□ 0.74
USP53-208ENST00000514305 GFM1Q96RP9 751 aaKnown RBP19.67■□□□□ 0.74
USP53-208ENST00000514305 GPR22Q99680 433 aa19.67■□□□□ 0.74
USP53-208ENST00000514305 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.67■□□□□ 0.74
USP53-208ENST00000514305 GPC4O75487 556 aa19.66■□□□□ 0.74
USP53-208ENST00000514305 SLCO2B1O94956 709 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms